RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
ATPAF2-208ENST00000496852 SIRT2Q8IXJ6 389 aa17.45■□□□□ 0.38
ATPAF2-208ENST00000496852 TTLL11Q8NHH1 800 aa17.45■□□□□ 0.38
ATPAF2-208ENST00000496852 C10orf71Q711Q0 1435 aa17.44■□□□□ 0.38
ATPAF2-208ENST00000496852 A0A1B0GUL6 1792 aa17.44■□□□□ 0.38
ATPAF2-208ENST00000496852 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
ATPAF2-208ENST00000496852 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
ATPAF2-208ENST00000496852 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-208ENST00000496852 COL4A1P02462 1669 aa17.43■□□□□ 0.38
ATPAF2-208ENST00000496852 POLD1P28340 1107 aa17.43■□□□□ 0.38
ATPAF2-208ENST00000496852 PTGER2P43116 358 aa17.43■□□□□ 0.38
ATPAF2-208ENST00000496852 SF3B3Q15393 1217 aaKnown RBP17.43■□□□□ 0.38
ATPAF2-208ENST00000496852 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
ATPAF2-208ENST00000496852 SSH3Q8TE77 659 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 BRIP1Q9BX63 1249 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 RTL9Q8NET4 1388 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 KLRG2A4D1S0 409 aaPredicted RBP17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 POLA2Q14181 598 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 CCDC136Q96JN2 1154 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 LRP5O75197 1615 aa17.42■□□□□ 0.38
ATPAF2-208ENST00000496852 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
ATPAF2-208ENST00000496852 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
ATPAF2-208ENST00000496852 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
ATPAF2-208ENST00000496852 GREM2Q9H772 168 aa17.41■□□□□ 0.38
ATPAF2-208ENST00000496852 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-208ENST00000496852 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-208ENST00000496852 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
ATPAF2-208ENST00000496852 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-208ENST00000496852 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
ATPAF2-208ENST00000496852 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
ATPAF2-208ENST00000496852 HMMRO75330 724 aa17.39■□□□□ 0.37
ATPAF2-208ENST00000496852 ITGA6P23229 1130 aa17.39■□□□□ 0.37
ATPAF2-208ENST00000496852 PDE6BP35913 854 aa17.39■□□□□ 0.37
ATPAF2-208ENST00000496852 IGHDP01880 384 aa17.38■□□□□ 0.37
ATPAF2-208ENST00000496852 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
ATPAF2-208ENST00000496852 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
ATPAF2-208ENST00000496852 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
ATPAF2-208ENST00000496852 PTPN12Q05209 780 aaKnown RBP17.37■□□□□ 0.37
ATPAF2-208ENST00000496852 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
ATPAF2-208ENST00000496852 RWDD1Q9H446 243 aaPredicted RBP17.37■□□□□ 0.37
ATPAF2-208ENST00000496852 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
ATPAF2-208ENST00000496852 ANKRD18BA2A2Z9 1011 aa17.36■□□□□ 0.37
ATPAF2-208ENST00000496852 SRGNP10124 158 aa17.36■□□□□ 0.37
ATPAF2-208ENST00000496852 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
ATPAF2-208ENST00000496852 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
ATPAF2-208ENST00000496852 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
ATPAF2-208ENST00000496852 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
ATPAF2-208ENST00000496852 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
ATPAF2-208ENST00000496852 ZNF594Q96JF6 807 aaPredicted RBP17.35■□□□□ 0.37
ATPAF2-208ENST00000496852 DCTPP1Q9H773 170 aa17.35■□□□□ 0.37
ATPAF2-208ENST00000496852 PDZRN3Q9UPQ7 1066 aa17.35■□□□□ 0.37
ATPAF2-208ENST00000496852 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
ATPAF2-208ENST00000496852 DDX46Q7L014 1031 aaKnown RBP17.34■□□□□ 0.37
ATPAF2-208ENST00000496852 KDM2BQ8NHM5 1336 aa17.34■□□□□ 0.37
ATPAF2-208ENST00000496852 NPR1P16066 1061 aa17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 C2CD5Q86YS7 1000 aa17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 MASTLQ96GX5 879 aa17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 RBM17Q96I25 401 aaKnown RBP17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 CDC5LQ99459 802 aaKnown RBP17.33■□□□□ 0.37
ATPAF2-208ENST00000496852 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
ATPAF2-208ENST00000496852 H0YIN7 160 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 CHRNA5P30532 468 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 CD2APQ9Y5K6 639 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 TGFB2P61812 414 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 GRAPQ13588 217 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 GRAPLQ8TC17 118 aaPredicted RBP17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 SIL1Q9H173 461 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
ATPAF2-208ENST00000496852 EYA2O00167 538 aa17.31■□□□□ 0.36
ATPAF2-208ENST00000496852 CIAO1O76071 339 aa17.31■□□□□ 0.36
ATPAF2-208ENST00000496852 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
ATPAF2-208ENST00000496852 ANKRD18AQ8IVF6 992 aa17.31■□□□□ 0.36
ATPAF2-208ENST00000496852 PUS3Q9BZE2 481 aaKnown RBP17.31■□□□□ 0.36
ATPAF2-208ENST00000496852 ARAP2Q8WZ64 1704 aa17.31■□□□□ 0.36
ATPAF2-208ENST00000496852 IGHMBP2P38935 993 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-208ENST00000496852 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
ATPAF2-208ENST00000496852 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
ATPAF2-208ENST00000496852 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
ATPAF2-208ENST00000496852 DPEP1P16444 411 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 KCNA3P22001 575 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 ALDH1B1P30837 517 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 MPHOSPH8Q99549 860 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 A0A0G2JLW4 131 aa17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATPAF2-208ENST00000496852 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms