RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 LRRFIP2Q9Y608 721 aaKnown RBP10.61□□□□□ -0.71
U2AF1-212ENST00000496462 APBB1O00213 710 aa10.6□□□□□ -0.71
U2AF1-212ENST00000496462 STYK1Q6J9G0 422 aa10.6□□□□□ -0.71
U2AF1-212ENST00000496462 PPP4R2Q9NY27 417 aa10.6□□□□□ -0.71
U2AF1-212ENST00000496462 IBTKQ9P2D0 1353 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-212ENST00000496462 IL15P40933 162 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-212ENST00000496462 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-212ENST00000496462 ERFEQ4G0M1 354 aa10.6□□□□□ -0.71
U2AF1-212ENST00000496462 DPP8Q6V1X1 898 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-212ENST00000496462 CRBNQ96SW2 442 aa10.6□□□□□ -0.71
U2AF1-212ENST00000496462 ARHGAP27Q6ZUM4 889 aa10.6□□□□□ -0.71
U2AF1-212ENST00000496462 ERC2O15083 957 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 PRR5LQ6MZQ0 368 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 MPNDQ8N594 471 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 CRAMP1Q96RY5 1269 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 GGA1Q9UJY5 639 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 NSFL1CQ9UNZ2 370 aaKnown RBP10.59□□□□□ -0.71
U2AF1-212ENST00000496462 ITGB4P16144 1822 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 RGPD3A6NKT7 1758 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-212ENST00000496462 RGPD4Q7Z3J3 1758 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 PDIA6Q15084 440 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 LRP5O75197 1615 aa10.59□□□□□ -0.71
U2AF1-212ENST00000496462 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.71
U2AF1-212ENST00000496462 ATP2B4P23634 1241 aa10.58□□□□□ -0.71
U2AF1-212ENST00000496462 EIF6P56537 245 aaKnown RBP10.58□□□□□ -0.71
U2AF1-212ENST00000496462 CCDC24Q8N4L8 307 aa10.58□□□□□ -0.71
U2AF1-212ENST00000496462 ITGA6P23229 1130 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 GRAPQ13588 217 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 GRAPLQ8TC17 118 aaPredicted RBP10.58□□□□□ -0.72
U2AF1-212ENST00000496462 UTRNP46939 3433 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 GOLGB1Q14789 3259 aaKnown RBP10.58□□□□□ -0.72
U2AF1-212ENST00000496462 A0A0G2JLW4 131 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 H7C1W4 665 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 KIF1BPQ96EK5 621 aa10.58□□□□□ -0.72
U2AF1-212ENST00000496462 ABCC4O15439 1325 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 SLC10A5Q5PT55 438 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 NIM1KQ8IY84 436 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 POLRMTO00411 1230 aaKnown RBP10.57□□□□□ -0.72
U2AF1-212ENST00000496462 SIL1Q9H173 461 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 MROH5Q6ZUA9 1318 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 TTC39AQ5SRH9 613 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-212ENST00000496462 MEIS3Q99687 375 aa10.57□□□□□ -0.72
U2AF1-212ENST00000496462 C4BP0C0L5 1744 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 TM4SF1P30408 202 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
U2AF1-212ENST00000496462 HDAC9Q9UKV0 1011 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 LMOD1P29536 600 aaPredicted RBP10.56□□□□□ -0.72
U2AF1-212ENST00000496462 SF3B3Q15393 1217 aaKnown RBP10.56□□□□□ -0.72
U2AF1-212ENST00000496462 LRRCC1Q9C099 1032 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 LEMD3Q9Y2U8 911 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 NTSR2O95665 410 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 C16orf71Q8IYS4 520 aaPredicted RBP10.56□□□□□ -0.72
U2AF1-212ENST00000496462 PLA2G12BQ9BX93 195 aa10.56□□□□□ -0.72
U2AF1-212ENST00000496462 UQCRFS1P1P0C7P4 283 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 ZGPATQ8N5A5 531 aaKnown RBP10.55□□□□□ -0.72
U2AF1-212ENST00000496462 BICC1Q9H694 974 aaKnown RBP10.55□□□□□ -0.72
U2AF1-212ENST00000496462 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 EYA2O00167 538 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 UFL1O94874 794 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 WASHC4Q2M389 1173 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 SPTY2D1Q68D10 685 aaPredicted RBP10.55□□□□□ -0.72
U2AF1-212ENST00000496462 AMOTL1Q8IY63 956 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 TAOK3Q9H2K8 898 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 PAPPAQ13219 1627 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 XDHP47989 1333 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 TMOD2Q9NZR1 351 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 LY75O60449 1722 aa10.55□□□□□ -0.72
U2AF1-212ENST00000496462 CENPQQ7L2Z9 268 aaPredicted RBP10.54□□□□□ -0.72
U2AF1-212ENST00000496462 SUCLG2Q96I99 432 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 C5P01031 1676 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 PPIP5K2O43314 1243 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 DPEP1P16444 411 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 SP8Q8IXZ3 490 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 C1orf115Q9H7X2 142 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 PXDNLA1KZ92 1463 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 IGKV5-2P06315 115 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 YBX3P16989 372 aaKnown RBP eCLIP10.54□□□□□ -0.72
U2AF1-212ENST00000496462 CHRNA5P30532 468 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 ZSCAN25Q6NSZ9 544 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 EXOC6Q8TAG9 804 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 USP44Q9H0E7 712 aa10.54□□□□□ -0.72
U2AF1-212ENST00000496462 ADCY9O60503 1353 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 DDR1Q08345 913 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 OGFOD1Q8N543 542 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 TNIP1Q15025 636 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms