RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, human

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERGIC3-219	ENST00000496172	ANKRD13D	Q6ZTN6	518 aa		13.53	□□□□□ -0.24
ERGIC3-219	ENST00000496172	WWC1	Q8IX03	1113 aa		13.53	□□□□□ -0.24
ERGIC3-219	ENST00000496172	PLBD2	Q8NHP8	589 aa		13.53	□□□□□ -0.24
ERGIC3-219	ENST00000496172	RBM17	Q96I25	401 aa	Known RBP	13.53	□□□□□ -0.24
ERGIC3-219	ENST00000496172	NLRP3	Q96P20	1036 aa		13.53	□□□□□ -0.24
ERGIC3-219	ENST00000496172	COL4A5	P29400	1685 aa		13.53	□□□□□ -0.24
ERGIC3-219	ENST00000496172	CRY2	Q49AN0	593 aa		13.52	□□□□□ -0.25
ERGIC3-219	ENST00000496172	CCDC30	Q5VVM6	783 aa		13.52	□□□□□ -0.25
ERGIC3-219	ENST00000496172	CST9	Q5W186	159 aa		13.52	□□□□□ -0.25
ERGIC3-219	ENST00000496172	PSMD1	Q99460	953 aa		13.52	□□□□□ -0.25
ERGIC3-219	ENST00000496172	ABCC12	Q96J65	1359 aa		13.52	□□□□□ -0.25
ERGIC3-219	ENST00000496172	IL16	Q14005	1332 aa		13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	GOLGA2	Q08379	1002 aa		13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	USP50	Q70EL3	339 aa	Predicted RBP	13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	NLRP10	Q86W26	655 aa		13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	FAM9B	Q8IZU0	186 aa		13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	C8orf58	Q8NAV2	365 aa		13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TMX4	Q9H1E5	349 aa	Predicted RBP	13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TRMT112	Q9UI30	125 aa	Known RBP	13.51	□□□□□ -0.25
ERGIC3-219	ENST00000496172	RIC1	Q4ADV7	1423 aa		13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	LMOD1	P29536	600 aa	Predicted RBP	13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	HOXA10	P31260	410 aa	Predicted RBP	13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	SCNN1D	P51172	638 aa		13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	SLC10A5	Q5PT55	438 aa		13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	RIC3	Q7Z5B4	369 aa		13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	SAPCD2	Q86UD0	394 aa		13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TSKS	Q9UJT2	592 aa		13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	SALL2	Q9Y467	1007 aa	Predicted RBP	13.5	□□□□□ -0.25
ERGIC3-219	ENST00000496172	SH3TC1	Q8TE82	1336 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	DDX58	O95786	925 aa	Known RBP	13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	DGKZ	Q13574	1117 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	GRIPAP1	Q4V328	841 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	PRPF38B	Q5VTL8	546 aa	Known RBP	13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	CC2D2B	Q6DHV5	1058 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	WDR63	Q8IWG1	891 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	SYNE4	Q8N205	404 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	JDP2	Q8WYK2	163 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TSR2	Q969E8	191 aa	Known RBP	13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	CRAMP1	Q96RY5	1269 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	STK31	Q9BXU1	1019 aa		13.49	□□□□□ -0.25
ERGIC3-219	ENST00000496172	AOC2	O75106	756 aa		13.48	□□□□□ -0.25
ERGIC3-219	ENST00000496172	EIF6	P56537	245 aa	Known RBP	13.48	□□□□□ -0.25
ERGIC3-219	ENST00000496172	FMR1	Q06787	632 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
ERGIC3-219	ENST00000496172	ATP5J2-PTCD1	G3V325	749 aa		13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	PPEF1	O14829	653 aa	Predicted RBP	13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TWISTNB	Q3B726	338 aa	Predicted RBP	13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	OLFM4	Q6UX06	510 aa		13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TSPYL6	Q8N831	410 aa		13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	ISCA1	Q9BUE6	129 aa		13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	PHAX	Q9H814	394 aa	Known RBP	13.47	□□□□□ -0.25
ERGIC3-219	ENST00000496172	ANKRD36C	Q5JPF3	1778 aa		13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TRAF5	O00463	557 aa		13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	HCLS1	P14317	486 aa	Predicted RBP	13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	HSP90B1	P14625	803 aa	Known RBP	13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	EPS15	P42566	896 aa		13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	GRM1	Q13255	1194 aa		13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TRIM28	Q13263	835 aa	Known RBP	13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	C3orf67	Q6ZVT6	689 aa		13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	DDX46	Q7L014	1031 aa	Known RBP	13.46	□□□□□ -0.25
ERGIC3-219	ENST00000496172	TCERG1	O14776	1098 aa	Known RBP	13.45	□□□□□ -0.26
ERGIC3-219	ENST00000496172	BBOX1	O75936	387 aa		13.45	□□□□□ -0.26
ERGIC3-219	ENST00000496172	CDHR2	Q9BYE9	1310 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	NOG	Q13253	232 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	ZNF428	Q96B54	188 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	FAM89A	Q96GI7	184 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	MYD88	Q99836	296 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	MYH16	Q9H6N6	1097 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	ADARB2	Q9NS39	739 aa	Known RBP	13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	PGAP2	Q9UHJ9	254 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	GJA3	Q9Y6H8	435 aa		13.44	□□□□□ -0.26
ERGIC3-219	ENST00000496172	ABCC4	O15439	1325 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	FANCI	Q9NVI1	1328 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	CELF2	O95319	508 aa	Known RBP	13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	NEXN	Q0ZGT2	675 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	CIAPIN1	Q6FI81	312 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	CCDC191	Q8NCU4	936 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	METTL22	Q9BUU2	404 aa	Predicted RBP	13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	SAGE1	Q9NXZ1	904 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	GPRC5D	Q9NZD1	345 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	ATP6V0A2	Q9Y487	856 aa		13.43	□□□□□ -0.26
ERGIC3-219	ENST00000496172	IRS4	O14654	1257 aa	Predicted RBP	13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	SLC4A2	P04920	1241 aa		13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	GRAP	Q13588	217 aa		13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	KSR2	Q6VAB6	950 aa		13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	TMC4	Q7Z404	712 aa		13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	SUPT20H	Q8NEM7	779 aa		13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	GRAPL	Q8TC17	118 aa	Predicted RBP	13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	ZC3H15	Q8WU90	426 aa	Known RBP	13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	CWC25	Q9NXE8	425 aa	Predicted RBP	13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	MAP3K2	Q9Y2U5	619 aa		13.42	□□□□□ -0.26
ERGIC3-219	ENST00000496172	AKAP11	Q9UKA4	1901 aa		13.41	□□□□□ -0.26
ERGIC3-219	ENST00000496172	SF3B3	Q15393	1217 aa	Known RBP	13.41	□□□□□ -0.26
ERGIC3-219	ENST00000496172	RTL5	Q5HYW3	569 aa	Predicted RBP	13.41	□□□□□ -0.26
ERGIC3-219	ENST00000496172	SP8	Q8IXZ3	490 aa		13.41	□□□□□ -0.26
ERGIC3-219	ENST00000496172	LARGE2	Q8N3Y3	721 aa		13.41	□□□□□ -0.26
ERGIC3-219	ENST00000496172	VPS33B	Q9H267	617 aa		13.41	□□□□□ -0.26
ERGIC3-219	ENST00000496172	PI4KAP2	A4QPH2	592 aa		13.4	□□□□□ -0.26
ERGIC3-219	ENST00000496172	SOX10	P56693	466 aa		13.4	□□□□□ -0.26

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