RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ANXA1P04083 346 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 GSPT1P15170 499 aaKnown RBP8.45□□□□□ -1.06
USP39-219ENST00000496047 G3BP1Q13283 466 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP39-219ENST00000496047 MFSD10Q14728 455 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 RABEP1Q15276 862 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 TMC2Q8TDI7 906 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 ZNF496Q96IT1 587 aaPredicted RBP8.45□□□□□ -1.06
USP39-219ENST00000496047 METTL22Q9BUU2 404 aaPredicted RBP8.45□□□□□ -1.06
USP39-219ENST00000496047 UTYO14607 1347 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 TTC41PQ6P2S7 1318 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 COL15A1P39059 1388 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
USP39-219ENST00000496047 ZNF831Q5JPB2 1677 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 EPB41L2O43491 1005 aaKnown RBP8.44□□□□□ -1.06
USP39-219ENST00000496047 SDSP20132 328 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 RBM6P78332 1123 aaKnown RBP8.44□□□□□ -1.06
USP39-219ENST00000496047 ANKRD13DQ6ZTN6 518 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 PLBD2Q8NHP8 589 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 DDX54Q8TDD1 881 aaKnown RBP8.44□□□□□ -1.06
USP39-219ENST00000496047 SNX21Q969T3 373 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 RILPL2Q969X0 211 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 MYD88Q99836 296 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 BTG4Q9NY30 223 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 STAP2Q9UGK3 403 aa8.44□□□□□ -1.06
USP39-219ENST00000496047 HIP1O00291 1037 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 GLRX3O76003 335 aaKnown RBP8.43□□□□□ -1.06
USP39-219ENST00000496047 IFIT2P09913 472 aaKnown RBP8.43□□□□□ -1.06
USP39-219ENST00000496047 NBPF7P0C2Y1 421 aaPredicted RBP8.43□□□□□ -1.06
USP39-219ENST00000496047 PTMSP20962 102 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 KIF6Q6ZMV9 814 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 MICALL2Q8IY33 904 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 RUFY2Q8WXA3 655 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
USP39-219ENST00000496047 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
USP39-219ENST00000496047 DISP2A7MBM2 1401 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
USP39-219ENST00000496047 BCORQ6W2J9 1755 aa8.43□□□□□ -1.06
USP39-219ENST00000496047 MYH13Q9UKX3 1938 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 NEURL1BA8MQ27 555 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 EXOC5O00471 708 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 STARD3NLO95772 234 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 PROSER3Q2NL68 480 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 CWF19L2Q2TBE0 894 aaKnown RBP8.42□□□□□ -1.06
USP39-219ENST00000496047 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 C16orf71Q8IYS4 520 aaPredicted RBP8.42□□□□□ -1.06
USP39-219ENST00000496047 TBC1D2Q9BYX2 928 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 CHMP5Q9NZZ3 219 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 RREB1Q92766 1687 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 CHD4Q14839 1912 aa8.42□□□□□ -1.06
USP39-219ENST00000496047 SALL3Q9BXA9 1300 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 USP42Q9H9J4 1324 aaKnown RBP8.41□□□□□ -1.06
USP39-219ENST00000496047 PRAMEF22A3QJZ6 481 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 K7ELQ4 463 aaPredicted RBP8.41□□□□□ -1.06
USP39-219ENST00000496047 SLC34A2O95436 690 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 MCM2P49736 904 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 GCKRQ14397 625 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 PDIA6Q15084 440 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 HSP90AB3PQ58FF7 597 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 KIAA1211Q6ZU35 1233 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 SUCLG2Q96I99 432 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
USP39-219ENST00000496047 BICC1Q9H694 974 aaKnown RBP8.41□□□□□ -1.06
USP39-219ENST00000496047 IL1RAPL2Q9NP60 686 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 CWC25Q9NXE8 425 aaPredicted RBP8.41□□□□□ -1.06
USP39-219ENST00000496047 USP16Q9Y5T5 823 aa8.41□□□□□ -1.06
USP39-219ENST00000496047 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.06
USP39-219ENST00000496047 ARAP2Q8WZ64 1704 aa8.4□□□□□ -1.06
USP39-219ENST00000496047 ANAPC15P60006 121 aa8.4□□□□□ -1.06
USP39-219ENST00000496047 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.06
USP39-219ENST00000496047 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.06
USP39-219ENST00000496047 DIAPH3Q9NSV4 1193 aa8.4□□□□□ -1.06
USP39-219ENST00000496047 LAMA4Q16363 1823 aa8.4□□□□□ -1.07
USP39-219ENST00000496047 RAD50Q92878 1312 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 A0A087WZG4 1122 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 PTCD1O75127 700 aaKnown RBP8.39□□□□□ -1.07
USP39-219ENST00000496047 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 UBE3BQ7Z3V4 1068 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 AACSQ86V21 672 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 CCDC191Q8NCU4 936 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 ESYT1Q9BSJ8 1104 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 ZSWIM6Q9HCJ5 1215 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 ECHDC1Q9NTX5 307 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 CHMP3Q9Y3E7 222 aa8.39□□□□□ -1.07
USP39-219ENST00000496047 BCL9O00512 1426 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 BTAF1O14981 1849 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 RFX7Q2KHR2 1363 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 AFF2P51816 1311 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 GOLGA6L22H0YM25 854 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 IGKV5-2P06315 115 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms