RNA–Protein interactions for RNA: ENST00000495606.5

IMP4-217, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 4

Gene IMP4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-217ENST00000495606 TRIM27P14373 513 aa18.37■□□□□ 0.53
IMP4-217ENST00000495606 CASP7P55210 303 aa18.37■□□□□ 0.53
IMP4-217ENST00000495606 RNF181Q9P0P0 153 aa18.37■□□□□ 0.53
IMP4-217ENST00000495606 RCAN3Q9UKA8 241 aa18.37■□□□□ 0.53
IMP4-217ENST00000495606 C21orf2O43822 256 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 PLIN1O60240 522 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 PRPF40BQ6NWY9 871 aaKnown RBP18.36■□□□□ 0.53
IMP4-217ENST00000495606 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 CNKSR1Q969H4 720 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 KIF16BQ96L93 1317 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
IMP4-217ENST00000495606 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
IMP4-217ENST00000495606 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 GRM8O00222 908 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 IPO8O15397 1037 aaKnown RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 NBPF7P0C2Y1 421 aaPredicted RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 HSPA1AP0DMV8 641 aaKnown RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 HSPA1BP0DMV9 641 aaKnown RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 HOXA10P31260 410 aaPredicted RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 SEC31BQ9NQW1 1179 aa18.35■□□□□ 0.53
IMP4-217ENST00000495606 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
IMP4-217ENST00000495606 RIC1Q4ADV7 1423 aa18.34■□□□□ 0.53
IMP4-217ENST00000495606 CDHR2Q9BYE9 1310 aa18.34■□□□□ 0.53
IMP4-217ENST00000495606 PDE8AO60658 829 aa18.34■□□□□ 0.53
IMP4-217ENST00000495606 SF3B3Q15393 1217 aaKnown RBP18.34■□□□□ 0.53
IMP4-217ENST00000495606 SLX4Q8IY92 1834 aa18.33■□□□□ 0.53
IMP4-217ENST00000495606 ABCC4O15439 1325 aa18.33■□□□□ 0.53
IMP4-217ENST00000495606 SUCLG2Q96I99 432 aa18.33■□□□□ 0.52
IMP4-217ENST00000495606 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
IMP4-217ENST00000495606 USP44Q9H0E7 712 aa18.33■□□□□ 0.52
IMP4-217ENST00000495606 LAMB2P55268 1798 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 RLBP1P12271 317 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 ALDH1B1P30837 517 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 CTSWP56202 376 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
IMP4-217ENST00000495606 TTLL11Q8NHH1 800 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 CELF1Q92879 486 aaKnown RBP18.32■□□□□ 0.52
IMP4-217ENST00000495606 DLEC1Q9Y238 1755 aa18.32■□□□□ 0.52
IMP4-217ENST00000495606 COL4A1P02462 1669 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 SBF1O95248 1867 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 TAF1P21675 1872 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
IMP4-217ENST00000495606 FOXO4P98177 505 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 TMEM57Q8N5G2 664 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 KAZALD1Q96I82 304 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 GREM2Q9H772 168 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 CACNA1SQ13698 1873 aa18.31■□□□□ 0.52
IMP4-217ENST00000495606 RASSF7Q02833 373 aa18.3■□□□□ 0.52
IMP4-217ENST00000495606 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
IMP4-217ENST00000495606 GRAPQ13588 217 aa18.29■□□□□ 0.52
IMP4-217ENST00000495606 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
IMP4-217ENST00000495606 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
IMP4-217ENST00000495606 GRAPLQ8TC17 118 aaPredicted RBP18.29■□□□□ 0.52
IMP4-217ENST00000495606 MEIS3Q99687 375 aa18.29■□□□□ 0.52
IMP4-217ENST00000495606 PLA2G12BQ9BX93 195 aa18.29■□□□□ 0.52
IMP4-217ENST00000495606 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
IMP4-217ENST00000495606 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
IMP4-217ENST00000495606 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
IMP4-217ENST00000495606 DZIP1LQ8IYY4 767 aaKnown RBP18.28■□□□□ 0.52
IMP4-217ENST00000495606 UTYO14607 1347 aa18.27■□□□□ 0.52
IMP4-217ENST00000495606 NFKBIEO00221 500 aa18.27■□□□□ 0.52
IMP4-217ENST00000495606 CSF1RP07333 972 aa18.27■□□□□ 0.52
IMP4-217ENST00000495606 HSP90B1P14625 803 aaKnown RBP18.27■□□□□ 0.52
IMP4-217ENST00000495606 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.52
IMP4-217ENST00000495606 BICC1Q9H694 974 aaKnown RBP18.27■□□□□ 0.52
IMP4-217ENST00000495606 BBOX1O75936 387 aa18.26■□□□□ 0.51
IMP4-217ENST00000495606 RPS8P62241 208 aaKnown RBP18.26■□□□□ 0.51
IMP4-217ENST00000495606 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
IMP4-217ENST00000495606 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
IMP4-217ENST00000495606 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
IMP4-217ENST00000495606 ITGA6P23229 1130 aa18.25■□□□□ 0.51
IMP4-217ENST00000495606 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
IMP4-217ENST00000495606 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
IMP4-217ENST00000495606 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
IMP4-217ENST00000495606 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
IMP4-217ENST00000495606 CCDC93Q567U6 631 aa18.24■□□□□ 0.51
IMP4-217ENST00000495606 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
IMP4-217ENST00000495606 LRRFIP2Q9Y608 721 aaKnown RBP18.24■□□□□ 0.51
IMP4-217ENST00000495606 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
IMP4-217ENST00000495606 SP8Q8IXZ3 490 aa18.23■□□□□ 0.51
IMP4-217ENST00000495606 ANKRD18AQ8IVF6 992 aa18.22■□□□□ 0.51
IMP4-217ENST00000495606 ZNF277Q9NRM2 450 aaPredicted RBP18.22■□□□□ 0.51
IMP4-217ENST00000495606 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
IMP4-217ENST00000495606 ANKRD18BA2A2Z9 1011 aa18.21■□□□□ 0.51
IMP4-217ENST00000495606 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
IMP4-217ENST00000495606 LMNB1P20700 586 aa18.21■□□□□ 0.51
IMP4-217ENST00000495606 GPSM2P81274 684 aa18.21■□□□□ 0.51
IMP4-217ENST00000495606 IFIT5Q13325 482 aaKnown RBP18.21■□□□□ 0.51
IMP4-217ENST00000495606 TAOK3Q9H2K8 898 aa18.21■□□□□ 0.51
IMP4-217ENST00000495606 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
IMP4-217ENST00000495606 SLC34A2O95436 690 aa18.2■□□□□ 0.5
IMP4-217ENST00000495606 SOGA3Q5TF21 947 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms