RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 URB2Q14146 1524 aaKnown RBP7.67□□□□□ -1.18
RBM39-240ENST00000495293 A6NJR5 290 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 FAM196BA6NMK8 535 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 SELPP16109 830 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 NFKB1P19838 968 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 IGFBP4P22692 258 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
RBM39-240ENST00000495293 INPP5BP32019 993 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 PRRT3Q5FWE3 981 aa7.66□□□□□ -1.18
RBM39-240ENST00000495293 LARP1Q6PKG0 1096 aaKnown RBP7.66□□□□□ -1.18
RBM39-240ENST00000495293 DNAJB12Q9NXW2 375 aaKnown RBP7.66□□□□□ -1.18
RBM39-240ENST00000495293 RBM19Q9Y4C8 960 aaKnown RBP7.66□□□□□ -1.18
RBM39-240ENST00000495293 A0A0A0MRY4 1105 aa7.65□□□□□ -1.18
RBM39-240ENST00000495293 AFF1P51825 1210 aaKnown RBP7.65□□□□□ -1.18
RBM39-240ENST00000495293 NEUROD1Q13562 356 aa7.65□□□□□ -1.18
RBM39-240ENST00000495293 SHISA2Q6UWI4 295 aa7.65□□□□□ -1.18
RBM39-240ENST00000495293 JPH1Q9HDC5 661 aaPredicted RBP7.65□□□□□ -1.18
RBM39-240ENST00000495293 DNMBPQ6XZF7 1577 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 TOPBP1Q92547 1522 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 ZBTB42B2RXF5 422 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 LILRB5O75023 590 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 WEE1P30291 646 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 IDH3AP50213 366 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
RBM39-240ENST00000495293 PSAPL1Q6NUJ1 521 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 LRFN2Q9ULH4 789 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 USP20Q9Y2K6 914 aa7.64□□□□□ -1.19
RBM39-240ENST00000495293 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.64□□□□□ -1.19
RBM39-240ENST00000495293 DGKZQ13574 1117 aa7.63□□□□□ -1.19
RBM39-240ENST00000495293 GRIK5Q16478 980 aa7.63□□□□□ -1.19
RBM39-240ENST00000495293 TRAPPC3LQ5T215 181 aa7.63□□□□□ -1.19
RBM39-240ENST00000495293 IFT140Q96RY7 1462 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 DYRK3O43781 588 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 APBA3O96018 575 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 CCINQ13939 588 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 MBTPS1Q14703 1052 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 CDCA8Q53HL2 280 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 KRT25Q7Z3Z0 450 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 IFT43Q96FT9 208 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 VRTNQ9H8Y1 702 aa7.62□□□□□ -1.19
RBM39-240ENST00000495293 TARSP26639 723 aaKnown RBP7.61□□□□□ -1.19
RBM39-240ENST00000495293 ADGRE1Q14246 886 aa7.61□□□□□ -1.19
RBM39-240ENST00000495293 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
RBM39-240ENST00000495293 MLLT1Q03111 559 aaPredicted RBP7.6□□□□□ -1.19
RBM39-240ENST00000495293 HIF1AQ16665 826 aa7.6□□□□□ -1.19
RBM39-240ENST00000495293 FAM26DQ5JW98 314 aa7.6□□□□□ -1.19
RBM39-240ENST00000495293 DMRTC2Q8IXT2 367 aaPredicted RBP7.6□□□□□ -1.19
RBM39-240ENST00000495293 OPLAHO14841 1288 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 CPB1P15086 417 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 ELNP15502 786 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 FKBP5Q13451 457 aaPredicted RBP7.59□□□□□ -1.19
RBM39-240ENST00000495293 PERM1Q5SV97 790 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 ZMYM1Q5SVZ6 1142 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
RBM39-240ENST00000495293 MYO19Q96H55 970 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 PNMA5Q96PV4 448 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 ZNF777Q9ULD5 760 aaPredicted RBP7.59□□□□□ -1.19
RBM39-240ENST00000495293 SOGA1O94964 1423 aa7.59□□□□□ -1.19
RBM39-240ENST00000495293 FOXO3O43524 673 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 SASH3O75995 380 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 MICAL2O94851 1124 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 DHX32Q7L7V1 743 aaKnown RBP7.58□□□□□ -1.2
RBM39-240ENST00000495293 FAM35AQ86V20 835 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 EFCC1Q9HA90 598 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 ZMIZ1Q9ULJ6 1067 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
RBM39-240ENST00000495293 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
RBM39-240ENST00000495293 MAP3K6O95382 1288 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 ARSDP51689 593 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 PRSS36Q5K4E3 855 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 TRPM4Q8TD43 1214 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 LENG1Q96BZ8 264 aaPredicted RBP7.57□□□□□ -1.2
RBM39-240ENST00000495293 NACC1Q96RE7 527 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
RBM39-240ENST00000495293 GTF3C3Q9Y5Q9 886 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 CUX1P39880 1505 aa7.57□□□□□ -1.2
RBM39-240ENST00000495293 FGD5Q6ZNL6 1462 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 WRNQ14191 1432 aaPredicted RBP eCLIP7.56□□□□□ -1.2
RBM39-240ENST00000495293 RGS9O75916 674 aaPredicted RBP7.56□□□□□ -1.2
RBM39-240ENST00000495293 FAM69CQ0P6D2 419 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 COX20Q5RI15 118 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 MSL1Q68DK7 614 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 HFE2Q6ZVN8 426 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
RBM39-240ENST00000495293 C9orf172C9J069 976 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 RARAP10276 462 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 GPLD1P80108 840 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
RBM39-240ENST00000495293 OCLNQ16625 522 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 C11orf91Q3C1V1 193 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 SAP130Q9H0E3 1048 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 NOVA2Q9UNW9 492 aaKnown RBP7.55□□□□□ -1.2
RBM39-240ENST00000495293 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
RBM39-240ENST00000495293 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 ZNF608Q9ULD9 1512 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms