RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 RGMBQ6NW40 437 aa7.86□□□□□ -1.15
PNKD-208ENST00000494954 CRAMP1Q96RY5 1269 aa7.86□□□□□ -1.15
PNKD-208ENST00000494954 RNF186Q9NXI6 227 aa7.86□□□□□ -1.15
PNKD-208ENST00000494954 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
PNKD-208ENST00000494954 NPC1L1Q9UHC9 1359 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 CASP8AP2Q9UKL3 1982 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 SLC10A3P09131 477 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 PAXIP1Q6ZW49 1069 aaPredicted RBP7.85□□□□□ -1.15
PNKD-208ENST00000494954 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
PNKD-208ENST00000494954 NECTIN2Q92692 538 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 DPF2Q92785 391 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 ZIC5Q96T25 663 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 ZNRF3Q9ULT6 936 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 ZNF609O15014 1411 aa7.85□□□□□ -1.15
PNKD-208ENST00000494954 ST18O60284 1047 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 HIRAP54198 1017 aaPredicted RBP7.84□□□□□ -1.15
PNKD-208ENST00000494954 HUNKP57058 714 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 FKBP1BP68106 108 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 INTS3Q68E01 1043 aaKnown RBP7.84□□□□□ -1.15
PNKD-208ENST00000494954 FBXO46Q6PJ61 603 aaPredicted RBP7.84□□□□□ -1.15
PNKD-208ENST00000494954 TTC5Q8N0Z6 440 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 LARGE2Q8N3Y3 721 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 FMNL2Q96PY5 1086 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 CSRNP1Q96S65 589 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 GLIS2Q9BZE0 524 aaPredicted RBP7.84□□□□□ -1.15
PNKD-208ENST00000494954 OCEL1Q9H607 264 aa7.84□□□□□ -1.15
PNKD-208ENST00000494954 RANBP2P49792 3224 aaKnown RBP7.83□□□□□ -1.16
PNKD-208ENST00000494954 ERVV-1B6SEH8 477 aa7.83□□□□□ -1.16
PNKD-208ENST00000494954 KIF23Q02241 960 aaPredicted RBP7.83□□□□□ -1.16
PNKD-208ENST00000494954 CXCL9Q07325 125 aa7.83□□□□□ -1.16
PNKD-208ENST00000494954 OLFM4Q6UX06 510 aa7.83□□□□□ -1.16
PNKD-208ENST00000494954 CDAN1Q8IWY9 1227 aa7.83□□□□□ -1.16
PNKD-208ENST00000494954 NIM1KQ8IY84 436 aa7.83□□□□□ -1.16
PNKD-208ENST00000494954 NPHP1O15259 732 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 VASPP50552 380 aaPredicted RBP7.82□□□□□ -1.16
PNKD-208ENST00000494954 KIAA2012Q0VF49 1180 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 TNIP1Q15025 636 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
PNKD-208ENST00000494954 CCDC24Q8N4L8 307 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 SUPT20HQ8NEM7 779 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 NYXQ9GZU5 481 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 GBA2Q9HCG7 927 aaPredicted RBP7.82□□□□□ -1.16
PNKD-208ENST00000494954 ATP6V0A2Q9Y487 856 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 GJA3Q9Y6H8 435 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 SZT2Q5T011 3432 aa7.82□□□□□ -1.16
PNKD-208ENST00000494954 TRPA1O75762 1119 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 A1BGP04217 495 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 RPS12P25398 132 aaKnown RBP7.81□□□□□ -1.16
PNKD-208ENST00000494954 TM4SF4P48230 202 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 GMPSP49915 693 aaPredicted RBP7.81□□□□□ -1.16
PNKD-208ENST00000494954 GRM1Q13255 1194 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 MTHFSDQ2M296 383 aaKnown RBP7.81□□□□□ -1.16
PNKD-208ENST00000494954 C2orf69Q8N8R5 385 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 IL17REQ8NFR9 667 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 NIP7Q9Y221 180 aaKnown RBP eCLIP7.81□□□□□ -1.16
PNKD-208ENST00000494954 CACNA1SQ13698 1873 aa7.81□□□□□ -1.16
PNKD-208ENST00000494954 SIPA1L3O60292 1781 aaPredicted RBP7.8□□□□□ -1.16
PNKD-208ENST00000494954 GSE1Q14687 1217 aa7.8□□□□□ -1.16
PNKD-208ENST00000494954 SLC10A5Q5PT55 438 aa7.8□□□□□ -1.16
PNKD-208ENST00000494954 ABCC12Q96J65 1359 aa7.8□□□□□ -1.16
PNKD-208ENST00000494954 GNAT3A8MTJ3 354 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 PPIP5K2O43314 1243 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 SNRPA1P09661 255 aaKnown RBP7.79□□□□□ -1.16
PNKD-208ENST00000494954 ZNF157P51786 506 aaPredicted RBP7.79□□□□□ -1.16
PNKD-208ENST00000494954 TEFQ10587 303 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 KRT26Q7Z3Y9 468 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 TMC4Q7Z404 712 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 GAS2L2Q8NHY3 880 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 TRPM4Q8TD43 1214 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 ZNF296Q8WUU4 475 aaPredicted RBP7.79□□□□□ -1.16
PNKD-208ENST00000494954 ARMC5Q96C12 935 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 TIMELESSQ9UNS1 1208 aa7.79□□□□□ -1.16
PNKD-208ENST00000494954 NBPF26B4DH59 902 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 H7C1D1 291 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 GPR25O00155 361 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 PPEF1O14829 653 aaPredicted RBP7.78□□□□□ -1.16
PNKD-208ENST00000494954 BBOX1O75936 387 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 AOC3Q16853 763 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
PNKD-208ENST00000494954 RASAL3Q86YV0 1011 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 SP8Q8IXZ3 490 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 RBM17Q96I25 401 aaKnown RBP7.78□□□□□ -1.16
PNKD-208ENST00000494954 CNOT7Q9UIV1 285 aaKnown RBP7.78□□□□□ -1.16
PNKD-208ENST00000494954 USP16Q9Y5T5 823 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 RBBP6Q7Z6E9 1792 aaKnown RBP7.78□□□□□ -1.16
PNKD-208ENST00000494954 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
PNKD-208ENST00000494954 ZNF467Q7Z7K2 595 aaPredicted RBP7.77□□□□□ -1.17
PNKD-208ENST00000494954 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
PNKD-208ENST00000494954 PRO3102Q9H379 93 aa7.77□□□□□ -1.17
PNKD-208ENST00000494954 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.77□□□□□ -1.17
PNKD-208ENST00000494954 BRCA2P51587 3418 aa7.77□□□□□ -1.17
PNKD-208ENST00000494954 TRIOBPQ9H2D6 2365 aa7.77□□□□□ -1.17
PNKD-208ENST00000494954 DLL1O00548 723 aa7.76□□□□□ -1.17
PNKD-208ENST00000494954 NTSR2O95665 410 aa7.76□□□□□ -1.17
PNKD-208ENST00000494954 TNNT2P45379 298 aaPredicted RBP7.76□□□□□ -1.17
PNKD-208ENST00000494954 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
PNKD-208ENST00000494954 MICALL2Q8IY33 904 aa7.76□□□□□ -1.17
PNKD-208ENST00000494954 ZNF34Q8IZ26 560 aa7.76□□□□□ -1.17
PNKD-208ENST00000494954 PDCD7Q8N8D1 485 aaKnown RBP7.76□□□□□ -1.17
PNKD-208ENST00000494954 PAPPA2Q9BXP8 1791 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms