RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 CREB3L3Q68CJ9 461 aa20.65■□□□□ 0.9
GABBR1-220ENST00000494877 JAKMIP1Q96N16 626 aaKnown RBP20.65■□□□□ 0.9
GABBR1-220ENST00000494877 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
GABBR1-220ENST00000494877 BRD1O95696 1058 aa20.65■□□□□ 0.9
GABBR1-220ENST00000494877 CYP19A1P11511 503 aaPredicted RBP20.65■□□□□ 0.9
GABBR1-220ENST00000494877 VPS53Q5VIR6 699 aa20.65■□□□□ 0.9
GABBR1-220ENST00000494877 GIGYF2Q6Y7W6 1299 aaKnown RBP20.65■□□□□ 0.9
GABBR1-220ENST00000494877 WNK3Q9BYP7 1800 aa20.64■□□□□ 0.9
GABBR1-220ENST00000494877 KLHL40Q2TBA0 621 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 RUFY3Q7L099 469 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 PLA2G12BQ9BX93 195 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 ISY1Q9ULR0 285 aaKnown RBP20.64■□□□□ 0.89
GABBR1-220ENST00000494877 CYP46A1Q9Y6A2 500 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 CCDC57Q2TAC2 916 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 LRRC24Q50LG9 513 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 RNF20Q5VTR2 975 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 ZBTB38Q8NAP3 1195 aaPredicted RBP20.64■□□□□ 0.89
GABBR1-220ENST00000494877 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 FBXO3Q9UK99 471 aa20.64■□□□□ 0.89
GABBR1-220ENST00000494877 CCDC9Q9Y3X0 531 aaKnown RBP20.64■□□□□ 0.89
GABBR1-220ENST00000494877 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
GABBR1-220ENST00000494877 ZNF594Q96JF6 807 aaPredicted RBP20.63■□□□□ 0.89
GABBR1-220ENST00000494877 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
GABBR1-220ENST00000494877 PDRG1Q9NUG6 133 aa20.63■□□□□ 0.89
GABBR1-220ENST00000494877 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
GABBR1-220ENST00000494877 JCADQ9P266 1359 aa20.63■□□□□ 0.89
GABBR1-220ENST00000494877 HSP90AB3PQ58FF7 597 aa20.63■□□□□ 0.89
GABBR1-220ENST00000494877 ARXQ96QS3 562 aa20.63■□□□□ 0.89
GABBR1-220ENST00000494877 LMBRD1Q9NUN5 540 aa20.63■□□□□ 0.89
GABBR1-220ENST00000494877 THRAP3Q9Y2W1 955 aaKnown RBP20.63■□□□□ 0.89
GABBR1-220ENST00000494877 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
GABBR1-220ENST00000494877 SLC27A2O14975 620 aa20.62■□□□□ 0.89
GABBR1-220ENST00000494877 TIMM10P62072 90 aa20.62■□□□□ 0.89
GABBR1-220ENST00000494877 ZNF589Q86UQ0 364 aaPredicted RBP20.62■□□□□ 0.89
GABBR1-220ENST00000494877 TICAM2Q86XR7 235 aa20.62■□□□□ 0.89
GABBR1-220ENST00000494877 CPA1P15085 419 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 PRIM1P49642 420 aaKnown RBP20.61■□□□□ 0.89
GABBR1-220ENST00000494877 FAM89AQ96GI7 184 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 SPATA31A1Q5TZJ5 1347 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 TAF5LO75529 589 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 PSMA5P28066 241 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 KBTBD3Q8NAB2 608 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 C8orf37Q96NL8 207 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 PODXL2Q9NZ53 605 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 ZNF609O15014 1411 aa20.61■□□□□ 0.89
GABBR1-220ENST00000494877 CSF1RP07333 972 aa20.6■□□□□ 0.89
GABBR1-220ENST00000494877 HMG20BQ9P0W2 317 aa20.6■□□□□ 0.89
GABBR1-220ENST00000494877 CEP126Q9P2H0 1117 aa20.6■□□□□ 0.89
GABBR1-220ENST00000494877 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.6■□□□□ 0.89
GABBR1-220ENST00000494877 RPAP1Q9BWH6 1393 aaPredicted RBP20.6■□□□□ 0.89
GABBR1-220ENST00000494877 HLFQ16534 295 aa20.6■□□□□ 0.89
GABBR1-220ENST00000494877 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
GABBR1-220ENST00000494877 PUS3Q9BZE2 481 aaKnown RBP20.6■□□□□ 0.89
GABBR1-220ENST00000494877 CDHR2Q9BYE9 1310 aa20.6■□□□□ 0.89
GABBR1-220ENST00000494877 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.59■□□□□ 0.89
GABBR1-220ENST00000494877 TSGA10IPQ3SY00 556 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
GABBR1-220ENST00000494877 NLRP10Q86W26 655 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
GABBR1-220ENST00000494877 ZBTB1Q9Y2K1 713 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 A0A1B0GUL7 405 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 MCMDC2Q4G0Z9 681 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 USPL1Q5W0Q7 1092 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
GABBR1-220ENST00000494877 WDR33Q9C0J8 1336 aaKnown RBP20.59■□□□□ 0.89
GABBR1-220ENST00000494877 DDB1Q16531 1140 aa20.58■□□□□ 0.89
GABBR1-220ENST00000494877 PALLDQ8WX93 1383 aa20.58■□□□□ 0.88
GABBR1-220ENST00000494877 XRCC6P12956 609 aaKnown RBP eCLIP20.58■□□□□ 0.882e-6■■□□□ 13.6
GABBR1-220ENST00000494877 IL6STP40189 918 aaPredicted RBP20.58■□□□□ 0.88
GABBR1-220ENST00000494877 MRE11P49959 708 aa20.58■□□□□ 0.88
GABBR1-220ENST00000494877 IFIT5Q13325 482 aaKnown RBP20.58■□□□□ 0.88
GABBR1-220ENST00000494877 FOXD4L5Q5VV16 416 aaPredicted RBP20.58■□□□□ 0.88
GABBR1-220ENST00000494877 FOXD4L4Q8WXT5 416 aaPredicted RBP20.58■□□□□ 0.88
GABBR1-220ENST00000494877 LARP6Q9BRS8 491 aaKnown RBP20.58■□□□□ 0.88
GABBR1-220ENST00000494877 PAG1Q9NWQ8 432 aa20.58■□□□□ 0.88
GABBR1-220ENST00000494877 ERVV-1B6SEH8 477 aa20.57■□□□□ 0.88
GABBR1-220ENST00000494877 PRPF40AO75400 957 aaKnown RBP20.57■□□□□ 0.88
GABBR1-220ENST00000494877 AKAP2Q9Y2D5 859 aa20.57■□□□□ 0.88
GABBR1-220ENST00000494877 NRAPQ86VF7 1730 aa20.57■□□□□ 0.88
GABBR1-220ENST00000494877 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
GABBR1-220ENST00000494877 GPTP24298 496 aa20.57■□□□□ 0.88
GABBR1-220ENST00000494877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.57■□□□□ 0.88
GABBR1-220ENST00000494877 GOLIM4O00461 696 aa20.56■□□□□ 0.88
GABBR1-220ENST00000494877 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
GABBR1-220ENST00000494877 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
GABBR1-220ENST00000494877 BLOC1S2Q6QNY1 142 aa20.56■□□□□ 0.88
GABBR1-220ENST00000494877 SPATA31A5Q5VU36 1347 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 SPATA31A7Q8IWB4 1347 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 ANKRD36CQ5JPF3 1778 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 SLIT2O94813 1529 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 IFIT1P09914 478 aaKnown RBP20.55■□□□□ 0.88
GABBR1-220ENST00000494877 KRT32Q14532 448 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 ALDH8A1Q9H2A2 487 aaPredicted RBP20.55■□□□□ 0.88
GABBR1-220ENST00000494877 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
GABBR1-220ENST00000494877 NUP98P52948 1817 aa20.55■□□□□ 0.88
GABBR1-220ENST00000494877 LARGE1O95461 756 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms