RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 FBXO41Q8TF61 875 aa10.32□□□□□ -0.76
RPGR-210ENST00000494841 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
RPGR-210ENST00000494841 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
RPGR-210ENST00000494841 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
RPGR-210ENST00000494841 HSPA1LP34931 641 aa10.31□□□□□ -0.76
RPGR-210ENST00000494841 CTC1Q2NKJ3 1217 aa10.31□□□□□ -0.76
RPGR-210ENST00000494841 EML3Q32P44 896 aa10.31□□□□□ -0.76
RPGR-210ENST00000494841 Q6ZVU0 165 aa10.31□□□□□ -0.76
RPGR-210ENST00000494841 OSBPL3Q9H4L5 887 aa10.31□□□□□ -0.76
RPGR-210ENST00000494841 MEIOBQ8N635 442 aa10.3□□□□□ -0.76
RPGR-210ENST00000494841 PANK3Q9H999 370 aa10.3□□□□□ -0.76
RPGR-210ENST00000494841 MYOM1P52179 1685 aa10.3□□□□□ -0.76
RPGR-210ENST00000494841 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
RPGR-210ENST00000494841 POLR3AO14802 1390 aaPredicted RBP10.29□□□□□ -0.76
RPGR-210ENST00000494841 KIF1AQ12756 1690 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 ST8SIA5O15466 376 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 MYCP01106 439 aaPredicted RBP10.29□□□□□ -0.76
RPGR-210ENST00000494841 USP4Q13107 963 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 HDGFL2Q7Z4V5 671 aaPredicted RBP10.29□□□□□ -0.76
RPGR-210ENST00000494841 TERF2IPQ9NYB0 399 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 PHLPP1O60346 1717 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 NPHP3Q7Z494 1330 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
RPGR-210ENST00000494841 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
RPGR-210ENST00000494841 ADH1AP07327 375 aa10.28□□□□□ -0.76
RPGR-210ENST00000494841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPGR-210ENST00000494841 ARID3AQ99856 593 aa10.28□□□□□ -0.76
RPGR-210ENST00000494841 AAASQ9NRG9 546 aa10.28□□□□□ -0.76
RPGR-210ENST00000494841 AKAP12Q02952 1782 aa10.28□□□□□ -0.76
RPGR-210ENST00000494841 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
RPGR-210ENST00000494841 A0A1W2PP64 1363 aa10.27□□□□□ -0.76
RPGR-210ENST00000494841 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
RPGR-210ENST00000494841 LCE2BO14633 110 aa10.27□□□□□ -0.77
RPGR-210ENST00000494841 AXIN1O15169 862 aa10.27□□□□□ -0.77
RPGR-210ENST00000494841 RFX1P22670 979 aa10.27□□□□□ -0.77
RPGR-210ENST00000494841 DDX10Q13206 875 aaKnown RBP10.27□□□□□ -0.77
RPGR-210ENST00000494841 NUTM2GQ5VZR2 741 aa10.27□□□□□ -0.77
RPGR-210ENST00000494841 KDF1Q8NAX2 398 aaPredicted RBP10.27□□□□□ -0.77
RPGR-210ENST00000494841 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
RPGR-210ENST00000494841 PXDNQ92626 1479 aa10.27□□□□□ -0.77
RPGR-210ENST00000494841 AHDC1Q5TGY3 1603 aaPredicted RBP10.26□□□□□ -0.77
RPGR-210ENST00000494841 Q6ZNB5 142 aa10.26□□□□□ -0.77
RPGR-210ENST00000494841 LRRC59Q96AG4 307 aaKnown RBP10.26□□□□□ -0.77
RPGR-210ENST00000494841 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
RPGR-210ENST00000494841 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
RPGR-210ENST00000494841 TTC21BQ7Z4L5 1316 aa10.26□□□□□ -0.77
RPGR-210ENST00000494841 ANKRD36BQ8N2N9 1353 aa10.26□□□□□ -0.77
RPGR-210ENST00000494841 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
RPGR-210ENST00000494841 USP6P35125 1406 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
RPGR-210ENST00000494841 BMP1P13497 986 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 GTF2IP78347 998 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 CNGB1Q14028 1251 aaPredicted RBP10.25□□□□□ -0.77
RPGR-210ENST00000494841 CYP2U1Q7Z449 544 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 ABTB2Q8N961 1025 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 PCDHGA11Q9Y5H2 935 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 SPATA31A3Q5VYP0 1347 aa10.25□□□□□ -0.77
RPGR-210ENST00000494841 COL16A1Q07092 1604 aaPredicted RBP10.25□□□□□ -0.77
RPGR-210ENST00000494841 SSH2Q76I76 1423 aa10.24□□□□□ -0.77
RPGR-210ENST00000494841 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
RPGR-210ENST00000494841 TRPM3Q9HCF6 1732 aaPredicted RBP10.24□□□□□ -0.77
RPGR-210ENST00000494841 CLDN10P78369 228 aa10.24□□□□□ -0.77
RPGR-210ENST00000494841 TRIM46Q7Z4K8 759 aa10.24□□□□□ -0.77
RPGR-210ENST00000494841 NME9Q86XW9 330 aa10.24□□□□□ -0.77
RPGR-210ENST00000494841 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
RPGR-210ENST00000494841 MRPL14Q6P1L8 145 aaKnown RBP10.23□□□□□ -0.77
RPGR-210ENST00000494841 TRIM50Q86XT4 487 aa10.23□□□□□ -0.77
RPGR-210ENST00000494841 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
RPGR-210ENST00000494841 KIAA1024Q9UPX6 916 aa10.23□□□□□ -0.77
RPGR-210ENST00000494841 SBNO1A3KN83 1393 aa10.23□□□□□ -0.77
RPGR-210ENST00000494841 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
RPGR-210ENST00000494841 FYB1O15117 783 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 RELBQ01201 579 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
RPGR-210ENST00000494841 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 TNS3Q68CZ2 1445 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 EDC4Q6P2E9 1401 aaKnown RBP10.22□□□□□ -0.77
RPGR-210ENST00000494841 ALS2Q96Q42 1657 aa10.22□□□□□ -0.77
RPGR-210ENST00000494841 STAU1O95793 577 aaKnown RBP10.21□□□□□ -0.77
RPGR-210ENST00000494841 FBLN1P23142 703 aa10.21□□□□□ -0.77
RPGR-210ENST00000494841 PTGIRP43119 386 aa10.21□□□□□ -0.77
RPGR-210ENST00000494841 CRTC2Q53ET0 693 aaPredicted RBP10.21□□□□□ -0.77
RPGR-210ENST00000494841 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
RPGR-210ENST00000494841 ARHGEF10LQ9HCE6 1279 aa10.21□□□□□ -0.77
RPGR-210ENST00000494841 KNSTRNQ9Y448 316 aa10.21□□□□□ -0.77
RPGR-210ENST00000494841 NRKQ7Z2Y5 1582 aa10.21□□□□□ -0.78
RPGR-210ENST00000494841 PIK3C2AO00443 1686 aa10.21□□□□□ -0.78
RPGR-210ENST00000494841 GNRH1P01148 92 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 RASA1P20936 1047 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 ATP1A2P50993 1020 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 SCNN1DP51172 638 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 PNPLA6Q8IY17 1366 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 TTC21AQ8NDW8 1320 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 ATP13A2Q9NQ11 1180 aa10.2□□□□□ -0.78
RPGR-210ENST00000494841 DNAAF2Q9NVR5 837 aaKnown RBP10.2□□□□□ -0.78
RPGR-210ENST00000494841 BRD4O60885 1362 aaPredicted RBP10.19□□□□□ -0.78
RPGR-210ENST00000494841 JCADQ9P266 1359 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms