RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
CALCA-206ENST00000494746 GNAI3P08754 354 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 CTSWP56202 376 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 FOXO4P98177 505 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
CALCA-206ENST00000494746 PDE8AO60658 829 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 ANKRD44Q8N8A2 993 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 EXOC6Q8TAG9 804 aa12.07□□□□□ -0.48
CALCA-206ENST00000494746 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
CALCA-206ENST00000494746 GNAI2P04899 355 aa12.06□□□□□ -0.48
CALCA-206ENST00000494746 CHRNA5P30532 468 aa12.06□□□□□ -0.48
CALCA-206ENST00000494746 TTLL11Q8NHH1 800 aa12.06□□□□□ -0.48
CALCA-206ENST00000494746 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
CALCA-206ENST00000494746 FHDC1Q9C0D6 1143 aaPredicted RBP12.06□□□□□ -0.48
CALCA-206ENST00000494746 SPEF2Q9C093 1822 aa12.06□□□□□ -0.48
CALCA-206ENST00000494746 PDE6BP35913 854 aa12.05□□□□□ -0.48
CALCA-206ENST00000494746 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
CALCA-206ENST00000494746 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
CALCA-206ENST00000494746 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
CALCA-206ENST00000494746 GREM2Q9H772 168 aa12.05□□□□□ -0.48
CALCA-206ENST00000494746 CD2APQ9Y5K6 639 aa12.05□□□□□ -0.48
CALCA-206ENST00000494746 CSF1RP07333 972 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 SRGNP10124 158 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
CALCA-206ENST00000494746 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
CALCA-206ENST00000494746 LMBR1LQ6UX01 489 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 DPEP1P16444 411 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 C2CD5Q86YS7 1000 aa12.04□□□□□ -0.48
CALCA-206ENST00000494746 KCNA3P22001 575 aa12.03□□□□□ -0.48
CALCA-206ENST00000494746 SEC31BQ9NQW1 1179 aa12.03□□□□□ -0.48
CALCA-206ENST00000494746 CHMP3Q9Y3E7 222 aa12.03□□□□□ -0.48
CALCA-206ENST00000494746 RTL9Q8NET4 1388 aa12.03□□□□□ -0.48
CALCA-206ENST00000494746 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
CALCA-206ENST00000494746 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 H0YIN7 160 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 ITGA6P23229 1130 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 TGFB2P61812 414 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 CEP85Q6P2H3 762 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 RPGRQ92834 1020 aaKnown RBP12.02□□□□□ -0.48
CALCA-206ENST00000494746 SYT17Q9BSW7 474 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.48
CALCA-206ENST00000494746 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.48
CALCA-206ENST00000494746 NPR1P16066 1061 aa12.02□□□□□ -0.49
CALCA-206ENST00000494746 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
CALCA-206ENST00000494746 MTX1Q13505 466 aa12.02□□□□□ -0.49
CALCA-206ENST00000494746 SLC51AQ86UW1 340 aa12.02□□□□□ -0.49
CALCA-206ENST00000494746 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
CALCA-206ENST00000494746 HDAC5Q9UQL6 1122 aa12.02□□□□□ -0.49
CALCA-206ENST00000494746 SRGAP3O43295 1099 aa12.01□□□□□ -0.49
CALCA-206ENST00000494746 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
CALCA-206ENST00000494746 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
CALCA-206ENST00000494746 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
CALCA-206ENST00000494746 CELF1Q92879 486 aaKnown RBP12.01□□□□□ -0.49
CALCA-206ENST00000494746 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.49
CALCA-206ENST00000494746 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
CALCA-206ENST00000494746 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
CALCA-206ENST00000494746 IFIT5Q13325 482 aaKnown RBP12□□□□□ -0.49
CALCA-206ENST00000494746 STYK1Q6J9G0 422 aa12□□□□□ -0.49
CALCA-206ENST00000494746 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
CALCA-206ENST00000494746 ZNF594Q96JF6 807 aaPredicted RBP12□□□□□ -0.49
CALCA-206ENST00000494746 LRRC37AA6NMS7 1700 aa12□□□□□ -0.49
CALCA-206ENST00000494746 A0A1B0GUL6 1792 aa12□□□□□ -0.49
CALCA-206ENST00000494746 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
CALCA-206ENST00000494746 GRAPQ13588 217 aa12□□□□□ -0.49
CALCA-206ENST00000494746 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
CALCA-206ENST00000494746 PRPF40BQ6NWY9 871 aaKnown RBP12□□□□□ -0.49
CALCA-206ENST00000494746 GRAPLQ8TC17 118 aaPredicted RBP12□□□□□ -0.49
CALCA-206ENST00000494746 ANKRD18BA2A2Z9 1011 aa11.99□□□□□ -0.49
CALCA-206ENST00000494746 ATP8B2P98198 1209 aa11.99□□□□□ -0.49
CALCA-206ENST00000494746 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
CALCA-206ENST00000494746 CRAMP1Q96RY5 1269 aa11.99□□□□□ -0.49
CALCA-206ENST00000494746 ARFGEF1Q9Y6D6 1849 aa11.99□□□□□ -0.49
CALCA-206ENST00000494746 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
CALCA-206ENST00000494746 POLA2Q14181 598 aa11.98□□□□□ -0.49
CALCA-206ENST00000494746 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
CALCA-206ENST00000494746 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
CALCA-206ENST00000494746 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
CALCA-206ENST00000494746 PA2G4Q9UQ80 394 aaKnown RBP11.98□□□□□ -0.49
CALCA-206ENST00000494746 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 RPS8P62241 208 aaKnown RBP11.97□□□□□ -0.49
CALCA-206ENST00000494746 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 RPAP2Q8IXW5 612 aaPredicted RBP11.97□□□□□ -0.49
CALCA-206ENST00000494746 CNKSR1Q969H4 720 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
CALCA-206ENST00000494746 AAMPQ13685 434 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
CALCA-206ENST00000494746 SIL1Q9H173 461 aa11.97□□□□□ -0.49
CALCA-206ENST00000494746 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
CALCA-206ENST00000494746 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
CALCA-206ENST00000494746 DALRD3Q5D0E6 543 aaKnown RBP11.96□□□□□ -0.49
CALCA-206ENST00000494746 COPRSQ9NQ92 184 aa11.96□□□□□ -0.49
CALCA-206ENST00000494746 BBOX1O75936 387 aa11.95□□□□□ -0.5
CALCA-206ENST00000494746 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms