RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 LAMB4A4D0S4 1761 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 ABCC6O95255 1503 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 NEXMIFQ5QGS0 1516 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 LMTK2Q8IWU2 1503 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 A0A0G2JS52 829 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 ERICH4A6NGS2 130 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 SPTLC1O15269 473 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 CDC45O75419 566 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 CCDC172P0C7W6 258 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 MCCP23508 829 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 GUCY2CP25092 1073 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 GTF2A1P52655 376 aaPredicted RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 RARSP54136 660 aaKnown RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 TMF1P82094 1093 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 SATB1Q01826 763 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 LMOD3Q0VAK6 560 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 NYAP1Q6ZVC0 841 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 SUGP1Q8IWZ8 645 aaKnown RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 SLC26A8Q96RN1 970 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 CARD10Q9BWT7 1032 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 KCNF1Q9H3M0 494 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 ATG3Q9NT62 314 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 SMC4Q9NTJ3 1288 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 CWC15Q9P013 229 aaKnown RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 RAI14Q9P0K7 980 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 POLKQ9UBT6 870 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 KCNG1Q9UIX4 513 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 DDX19BQ9UMR2 479 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 ATP1B4Q9UN42 357 aaPredicted RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 CEP83Q9Y592 693 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 PAXBP1Q9Y5B6 917 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 RGPD1P0DJD0 1748 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 RTL1A6NKG5 1358 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 NSD2O96028 1365 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ELP1O95163 1332 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ZFYVE16Q7Z3T8 1539 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.25□□□□□ -1.89
MDC1-208ENST00000494654 C4AP0C0L4 1744 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 C4BP0C0L5 1744 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 A0A1B0GUL7 405 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 C6orf229H3BNL8 230 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 MYO1CO00159 1063 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 HTATSF1O43719 755 aaKnown RBP3.25□□□□□ -1.89
MDC1-208ENST00000494654 IGSF3O75054 1194 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 NR1I2O75469 434 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ADCY5O95622 1261 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ADH1BP00325 375 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 CPP00450 1065 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 APPP05067 770 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 RLBP1P12271 317 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 CLK2P49760 499 aaKnown RBP3.25□□□□□ -1.89
MDC1-208ENST00000494654 TPM4P67936 248 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 NUCB1Q02818 461 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 CCDC27Q2M243 656 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 TSGA10IPQ3SY00 556 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 TEX35Q5T0J7 233 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 CCDC183Q5T5S1 534 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ZKSCAN2Q63HK3 967 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 PTCRAQ6ISU1 281 aaPredicted RBP3.25□□□□□ -1.89
MDC1-208ENST00000494654 LIAT1Q6ZQX7 453 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 SRLQ86TD4 932 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 EGFL6Q8IUX8 553 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 CCDC112Q8NEF3 446 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ERO1AQ96HE7 468 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 NOL10Q9BSC4 688 aaKnown RBP3.25□□□□□ -1.89
MDC1-208ENST00000494654 SLC6A16Q9GZN6 736 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 TTC12Q9H892 705 aaPredicted RBP3.25□□□□□ -1.89
MDC1-208ENST00000494654 ZNF446Q9NWS9 450 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 PSD3Q9NYI0 1048 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 DONSONQ9NYP3 566 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 RSPH14Q9UHP6 348 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 PYCARDQ9ULZ3 195 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 YTHDC2Q9H6S0 1430 aaKnown RBP3.25□□□□□ -1.89
MDC1-208ENST00000494654 NUP155O75694 1391 aa3.25□□□□□ -1.89
MDC1-208ENST00000494654 ABCC3O15438 1527 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 TULP4Q9NRJ4 1543 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 ATP7BP35670 1465 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 TMEM131LA2VDJ0 1609 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 LTBP4Q8N2S1 1624 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 FAM177BA6PVY3 158 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 KIF2AO00139 706 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 ATP8B1O43520 1251 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 LILRB3O75022 631 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 FMNL1O95466 1100 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 BRD1O95696 1058 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 H2AFXP16104 143 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 ATP2B1P20020 1258 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 CDC25BP30305 580 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 TNNT3P45378 269 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 HNRNPH2P55795 449 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 USP46P62068 366 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 BMS1Q14692 1282 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 TTC31Q49AM3 519 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 HSP90AB3PQ58FF7 597 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 NOM1Q5C9Z4 860 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 CT47A1Q5JQC4 288 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 FBXO38Q6PIJ6 1188 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 TBC1D9Q6ZT07 1266 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms