RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 ISCA1Q9BUE6 129 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 BOLA2Q9H3K6 86 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 ZNF609O15014 1411 aa13.49□□□□□ -0.25
LDHA-211ENST00000494573 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
LDHA-211ENST00000494573 CIAO1O76071 339 aa13.49□□□□□ -0.25
LDHA-211ENST00000494573 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
LDHA-211ENST00000494573 PKP1Q13835 747 aa13.49□□□□□ -0.25
LDHA-211ENST00000494573 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
LDHA-211ENST00000494573 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
LDHA-211ENST00000494573 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
LDHA-211ENST00000494573 ZSWIM6Q9HCJ5 1215 aa13.49□□□□□ -0.25
LDHA-211ENST00000494573 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
LDHA-211ENST00000494573 LIMCH1Q9UPQ0 1083 aa13.49□□□□□ -0.25
LDHA-211ENST00000494573 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
LDHA-211ENST00000494573 BCL9O00512 1426 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
LDHA-211ENST00000494573 IL15P40933 162 aaPredicted RBP13.48□□□□□ -0.25
LDHA-211ENST00000494573 AK2P54819 239 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 CREB3L3Q68CJ9 461 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 HAUS7Q99871 368 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 ALDH8A1Q9H2A2 487 aaPredicted RBP13.48□□□□□ -0.25
LDHA-211ENST00000494573 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
LDHA-211ENST00000494573 DDX49Q9Y6V7 483 aaKnown RBP13.48□□□□□ -0.25
LDHA-211ENST00000494573 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
LDHA-211ENST00000494573 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
LDHA-211ENST00000494573 CASTP20810 708 aaKnown RBP13.47□□□□□ -0.25
LDHA-211ENST00000494573 PSMA5P28066 241 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
LDHA-211ENST00000494573 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 PLA2G12BQ9BX93 195 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 ZBTB3Q9H5J0 574 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
LDHA-211ENST00000494573 HMG20BQ9P0W2 317 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
LDHA-211ENST00000494573 CYP46A1Q9Y6A2 500 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 LAMB2P55268 1798 aa13.47□□□□□ -0.25
LDHA-211ENST00000494573 EYA2O00167 538 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 SLC27A2O14975 620 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 STARD3NLO95772 234 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 TSGA10IPQ3SY00 556 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
LDHA-211ENST00000494573 RUFY3Q7L099 469 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
LDHA-211ENST00000494573 PIGBQ92521 554 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
LDHA-211ENST00000494573 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 PDRG1Q9NUG6 133 aa13.46□□□□□ -0.25
LDHA-211ENST00000494573 LTBP4Q8N2S1 1624 aa13.46□□□□□ -0.26
LDHA-211ENST00000494573 CDHR2Q9BYE9 1310 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
LDHA-211ENST00000494573 KCNJ4P48050 445 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 ZNF445P59923 1031 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 HSP90AB3PQ58FF7 597 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 DNAJC10Q8IXB1 793 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
LDHA-211ENST00000494573 MAP3K15Q6ZN16 1313 aa13.44□□□□□ -0.26
LDHA-211ENST00000494573 SH3TC1Q8TE82 1336 aa13.44□□□□□ -0.26
LDHA-211ENST00000494573 ZNF831Q5JPB2 1677 aa13.44□□□□□ -0.26
LDHA-211ENST00000494573 MBD3O95983 291 aa13.44□□□□□ -0.26
LDHA-211ENST00000494573 ADCK5Q3MIX3 580 aa13.44□□□□□ -0.26
LDHA-211ENST00000494573 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
LDHA-211ENST00000494573 ASAP1Q9ULH1 1129 aa13.44□□□□□ -0.26
LDHA-211ENST00000494573 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
LDHA-211ENST00000494573 TAF5LO75529 589 aa13.43□□□□□ -0.26
LDHA-211ENST00000494573 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
LDHA-211ENST00000494573 KRT32Q14532 448 aa13.43□□□□□ -0.26
LDHA-211ENST00000494573 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
LDHA-211ENST00000494573 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
LDHA-211ENST00000494573 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
LDHA-211ENST00000494573 ABCC12Q96J65 1359 aa13.43□□□□□ -0.26
LDHA-211ENST00000494573 LRP5O75197 1615 aa13.42□□□□□ -0.26
LDHA-211ENST00000494573 EXOC5O00471 708 aa13.42□□□□□ -0.26
LDHA-211ENST00000494573 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
LDHA-211ENST00000494573 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
LDHA-211ENST00000494573 ZBTB38Q8NAP3 1195 aaPredicted RBP13.42□□□□□ -0.26
LDHA-211ENST00000494573 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
LDHA-211ENST00000494573 SMC3Q9UQE7 1217 aa13.42□□□□□ -0.26
LDHA-211ENST00000494573 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
LDHA-211ENST00000494573 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
LDHA-211ENST00000494573 CASZ1Q86V15 1759 aa13.41□□□□□ -0.26
LDHA-211ENST00000494573 CSF1RP07333 972 aa13.41□□□□□ -0.26
LDHA-211ENST00000494573 CYP19A1P11511 503 aaPredicted RBP13.41□□□□□ -0.26
LDHA-211ENST00000494573 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
LDHA-211ENST00000494573 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms