RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 PDE8AO60658 829 aa27.94■■■□□ 2.06
HPS3-207ENST00000494327 SP8Q8IXZ3 490 aa27.94■■■□□ 2.06
HPS3-207ENST00000494327 DDX60Q8IY21 1712 aaKnown RBP27.94■■■□□ 2.06
HPS3-207ENST00000494327 TIAM2Q8IVF5 1701 aa27.93■■■□□ 2.06
HPS3-207ENST00000494327 F6X3S4 739 aa27.93■■■□□ 2.06
HPS3-207ENST00000494327 C16orf71Q8IYS4 520 aaPredicted RBP27.93■■■□□ 2.06
HPS3-207ENST00000494327 CELF1Q92879 486 aaKnown RBP27.93■■■□□ 2.06
HPS3-207ENST00000494327 CCDC85AQ96PX6 553 aaPredicted RBP27.93■■■□□ 2.06
HPS3-207ENST00000494327 SNED1Q8TER0 1413 aa27.92■■■□□ 2.06
HPS3-207ENST00000494327 CDHR2Q9BYE9 1310 aa27.91■■■□□ 2.06
HPS3-207ENST00000494327 DDNO94850 711 aaPredicted RBP27.9■■■□□ 2.06
HPS3-207ENST00000494327 CCDC152Q4G0S7 254 aa27.9■■■□□ 2.06
HPS3-207ENST00000494327 DPP8Q6V1X1 898 aaPredicted RBP27.9■■■□□ 2.06
HPS3-207ENST00000494327 UBE3BQ7Z3V4 1068 aa27.9■■■□□ 2.06
HPS3-207ENST00000494327 MPNDQ8N594 471 aa27.9■■■□□ 2.06
HPS3-207ENST00000494327 LINS1Q8NG48 757 aa27.9■■■□□ 2.06
HPS3-207ENST00000494327 SEC31BQ9NQW1 1179 aa27.9■■■□□ 2.06
HPS3-207ENST00000494327 GCKRQ14397 625 aa27.89■■■□□ 2.06
HPS3-207ENST00000494327 TMC4Q7Z404 712 aa27.89■■■□□ 2.06
HPS3-207ENST00000494327 LARGE2Q8N3Y3 721 aa27.89■■■□□ 2.06
HPS3-207ENST00000494327 JDP2Q8WYK2 163 aa27.89■■■□□ 2.06
HPS3-207ENST00000494327 H7C1W4 665 aa27.88■■■□□ 2.05
HPS3-207ENST00000494327 TOMM70O94826 608 aa27.88■■■□□ 2.05
HPS3-207ENST00000494327 RPS8P62241 208 aaKnown RBP27.88■■■□□ 2.05
HPS3-207ENST00000494327 DICER1Q9UPY3 1922 aaKnown RBP27.87■■■□□ 2.05
HPS3-207ENST00000494327 VEGFAP15692 232 aaPredicted RBP27.87■■■□□ 2.05
HPS3-207ENST00000494327 PPIP5K2O43314 1243 aa27.86■■■□□ 2.05
HPS3-207ENST00000494327 SLC4A10Q6U841 1118 aa27.86■■■□□ 2.05
HPS3-207ENST00000494327 TRMT2AQ8IZ69 625 aaKnown RBP27.86■■■□□ 2.05
HPS3-207ENST00000494327 MRPL50Q8N5N7 158 aaKnown RBP27.86■■■□□ 2.05
HPS3-207ENST00000494327 SUPT20HQ8NEM7 779 aa27.86■■■□□ 2.05
HPS3-207ENST00000494327 TAF1P21675 1872 aa27.86■■■□□ 2.05
HPS3-207ENST00000494327 CTSWP56202 376 aa27.85■■■□□ 2.05
HPS3-207ENST00000494327 AOC3Q16853 763 aa27.85■■■□□ 2.05
HPS3-207ENST00000494327 BEND3Q5T5X7 828 aa27.85■■■□□ 2.05
HPS3-207ENST00000494327 BCL2L13Q9BXK5 485 aa27.85■■■□□ 2.05
HPS3-207ENST00000494327 ZNF541Q9H0D2 1346 aa27.85■■■□□ 2.05
HPS3-207ENST00000494327 CACNA1FO60840 1977 aa27.84■■■□□ 2.05
HPS3-207ENST00000494327 SSH1Q8WYL5 1049 aa27.84■■■□□ 2.05
HPS3-207ENST00000494327 RTFDC1Q9BY42 306 aaPredicted RBP27.84■■■□□ 2.05
HPS3-207ENST00000494327 NSFL1CQ9UNZ2 370 aaKnown RBP27.84■■■□□ 2.05
HPS3-207ENST00000494327 POTECB2RU33 542 aa27.83■■■□□ 2.05
HPS3-207ENST00000494327 FZD9O00144 591 aa27.83■■■□□ 2.05
HPS3-207ENST00000494327 NIM1KQ8IY84 436 aa27.83■■■□□ 2.05
HPS3-207ENST00000494327 TTLL11Q8NHH1 800 aa27.83■■■□□ 2.05
HPS3-207ENST00000494327 EIF6P56537 245 aaKnown RBP27.82■■■□□ 2.04
HPS3-207ENST00000494327 COL4A1P02462 1669 aa27.81■■■□□ 2.04
HPS3-207ENST00000494327 GPSM2P81274 684 aa27.81■■■□□ 2.04
HPS3-207ENST00000494327 HNRNPUQ00839 825 aaKnown RBP eCLIP27.81■■■□□ 2.04
HPS3-207ENST00000494327 ANKRD18AQ8IVF6 992 aa27.81■■■□□ 2.04
HPS3-207ENST00000494327 CASP7P55210 303 aa27.8■■■□□ 2.04
HPS3-207ENST00000494327 RBM46Q8TBY0 533 aaKnown RBP27.8■■■□□ 2.04
HPS3-207ENST00000494327 VPS33BQ9H267 617 aa27.8■■■□□ 2.04
HPS3-207ENST00000494327 GREM2Q9H772 168 aa27.8■■■□□ 2.04
HPS3-207ENST00000494327 GJA3Q9Y6H8 435 aa27.8■■■□□ 2.04
HPS3-207ENST00000494327 COL4A5P29400 1685 aa27.79■■■□□ 2.04
HPS3-207ENST00000494327 C6orf229H3BNL8 230 aa27.79■■■□□ 2.04
HPS3-207ENST00000494327 SRCIN1Q9C0H9 1055 aa27.79■■■□□ 2.04
HPS3-207ENST00000494327 SMC4Q9NTJ3 1288 aa27.79■■■□□ 2.04
HPS3-207ENST00000494327 CDC5LQ99459 802 aaKnown RBP27.78■■■□□ 2.04
HPS3-207ENST00000494327 PLA2G12BQ9BX93 195 aa27.78■■■□□ 2.04
HPS3-207ENST00000494327 KIAA2012Q0VF49 1180 aa27.77■■■□□ 2.04
HPS3-207ENST00000494327 ALDH1L2Q3SY69 923 aa27.77■■■□□ 2.04
HPS3-207ENST00000494327 C9orf78Q9NZ63 289 aaPredicted RBP27.77■■■□□ 2.04
HPS3-207ENST00000494327 WDR90Q96KV7 1748 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 RIMBP2O15034 1052 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 ALDH1L1O75891 902 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 WASHC4Q2M389 1173 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 GPC2Q8N158 579 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 ANKIB1Q9P2G1 1089 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 POLLQ9UGP5 575 aa27.76■■■□□ 2.03
HPS3-207ENST00000494327 PTPRCP08575 1304 aa27.75■■■□□ 2.03
HPS3-207ENST00000494327 IQCA1LA6NCM1 817 aa27.75■■■□□ 2.03
HPS3-207ENST00000494327 L3MBTL3Q96JM7 780 aaPredicted RBP27.75■■■□□ 2.03
HPS3-207ENST00000494327 ZNRF3Q9ULT6 936 aa27.75■■■□□ 2.03
HPS3-207ENST00000494327 GRM8O00222 908 aa27.74■■■□□ 2.03
HPS3-207ENST00000494327 CT47B1P0C2W7 299 aaPredicted RBP27.74■■■□□ 2.03
HPS3-207ENST00000494327 HSPA6P17066 643 aa27.74■■■□□ 2.03
HPS3-207ENST00000494327 GPR101Q96P66 508 aaPredicted RBP27.74■■■□□ 2.03
HPS3-207ENST00000494327 ITGA6P23229 1130 aa27.73■■■□□ 2.03
HPS3-207ENST00000494327 FAM161AQ3B820 660 aa27.73■■■□□ 2.03
HPS3-207ENST00000494327 SMC1BQ8NDV3 1235 aa27.73■■■□□ 2.03
HPS3-207ENST00000494327 TBC1D16Q8TBP0 767 aa27.73■■■□□ 2.03
HPS3-207ENST00000494327 CHMP3Q9Y3E7 222 aa27.73■■■□□ 2.03
HPS3-207ENST00000494327 LRRC37AA6NMS7 1700 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 UFL1O94874 794 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 CSF1RP07333 972 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 FSTL1Q12841 308 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 EYA3Q99504 573 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 HACL1Q9UJ83 578 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 RTL9Q8NET4 1388 aa27.72■■■□□ 2.03
HPS3-207ENST00000494327 IGHMBP2P38935 993 aaKnown RBP27.71■■■□□ 2.03
HPS3-207ENST00000494327 FOXO4P98177 505 aa27.71■■■□□ 2.03
HPS3-207ENST00000494327 TAF1DQ9H5J8 278 aaPredicted RBP27.71■■■□□ 2.03
HPS3-207ENST00000494327 DUOX1Q9NRD9 1551 aa27.71■■■□□ 2.03
HPS3-207ENST00000494327 PODXL2Q9NZ53 605 aa27.71■■■□□ 2.03
HPS3-207ENST00000494327 GGA1Q9UJY5 639 aa27.71■■■□□ 2.03
HPS3-207ENST00000494327 CXCL9Q07325 125 aa27.7■■■□□ 2.02
HPS3-207ENST00000494327 BSDC1Q9NW68 430 aaPredicted RBP27.7■■■□□ 2.02
HPS3-207ENST00000494327 RAD17O75943 681 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms