RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TRPM4Q8TD43 1214 aa5.33□□□□□ -1.56
PTPN12-212ENST00000494248 CSRNP1Q96S65 589 aa5.33□□□□□ -1.56
PTPN12-212ENST00000494248 SMG9Q9H0W8 520 aaKnown RBP5.33□□□□□ -1.56
PTPN12-212ENST00000494248 DMGDHQ9UI17 866 aaKnown RBP5.33□□□□□ -1.56
PTPN12-212ENST00000494248 NOD1Q9Y239 953 aa5.33□□□□□ -1.56
PTPN12-212ENST00000494248 BCS1LQ9Y276 419 aa5.33□□□□□ -1.56
PTPN12-212ENST00000494248 APBB1O00213 710 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 GSC2O15499 205 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 C21orf2O43822 256 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 MAP3K6O95382 1288 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 WNT11O96014 354 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 GLB1P16278 677 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 NFIAQ12857 509 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 SETDB1Q15047 1291 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 ZNF124Q15973 351 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 EML3Q32P44 896 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 HFE2Q6ZVN8 426 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 ALDH16A1Q8IZ83 802 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 PNMA5Q96PV4 448 aa5.32□□□□□ -1.56
PTPN12-212ENST00000494248 HMX2A2RU54 273 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 TARSP26639 723 aaKnown RBP5.31□□□□□ -1.56
PTPN12-212ENST00000494248 NCOA4Q13772 614 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 INTS5Q6P9B9 1019 aaKnown RBP5.31□□□□□ -1.56
PTPN12-212ENST00000494248 DHX32Q7L7V1 743 aaKnown RBP5.31□□□□□ -1.56
PTPN12-212ENST00000494248 TRIM42Q8IWZ5 723 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 DEPDC4Q8N2C3 294 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 ASIC4Q96FT7 647 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 IFT43Q96FT9 208 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 C7orf69Q9H7B7 122 aa5.31□□□□□ -1.56
PTPN12-212ENST00000494248 WISP1O95388 367 aa5.3□□□□□ -1.56
PTPN12-212ENST00000494248 SKIP12755 728 aa5.3□□□□□ -1.56
PTPN12-212ENST00000494248 HOXA10P31260 410 aaPredicted RBP5.3□□□□□ -1.56
PTPN12-212ENST00000494248 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
PTPN12-212ENST00000494248 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.3□□□□□ -1.56
PTPN12-212ENST00000494248 KRT25Q7Z3Z0 450 aa5.3□□□□□ -1.56
PTPN12-212ENST00000494248 GPLD1P80108 840 aa5.29□□□□□ -1.56
PTPN12-212ENST00000494248 SEMA3FQ13275 785 aa5.29□□□□□ -1.56
PTPN12-212ENST00000494248 NFXL1Q6ZNB6 911 aa5.29□□□□□ -1.56
PTPN12-212ENST00000494248 GDPD2Q9HCC8 539 aa5.29□□□□□ -1.56
PTPN12-212ENST00000494248 TM4SF5O14894 197 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 DHX15O43143 795 aaKnown RBP5.28□□□□□ -1.56
PTPN12-212ENST00000494248 GRIK1P39086 918 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 COL19A1Q14993 1142 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 PCSK7Q16549 785 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 ZNF648Q5T619 568 aaPredicted RBP5.28□□□□□ -1.56
PTPN12-212ENST00000494248 RNF43Q68DV7 783 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 CBLL1Q75N03 491 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 IL22RA1Q8N6P7 574 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 GALNT11Q8NCW6 608 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 TPCN2Q8NHX9 752 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 COL26A1Q96A83 441 aa5.28□□□□□ -1.56
PTPN12-212ENST00000494248 J3QW42 95 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 PPP1R12BO60237 982 aaPredicted RBP5.27□□□□□ -1.57
PTPN12-212ENST00000494248 SASH3O75995 380 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 INPP5BP32019 993 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 CLDN10P78369 228 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 IER5Q5VY09 327 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 TSEN2Q8NCE0 465 aaKnown RBP5.27□□□□□ -1.57
PTPN12-212ENST00000494248 SHKBP1Q8TBC3 707 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 NGLY1Q96IV0 654 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 C2orf49Q9BVC5 232 aaPredicted RBP5.27□□□□□ -1.57
PTPN12-212ENST00000494248 KCNK4Q9NYG8 393 aa5.27□□□□□ -1.57
PTPN12-212ENST00000494248 ABL2P42684 1182 aa5.26□□□□□ -1.57
PTPN12-212ENST00000494248 CCDC102BQ68D86 513 aa5.26□□□□□ -1.57
PTPN12-212ENST00000494248 GDF6Q6KF10 455 aaPredicted RBP5.26□□□□□ -1.57
PTPN12-212ENST00000494248 PLD4Q96BZ4 506 aa5.26□□□□□ -1.57
PTPN12-212ENST00000494248 FAM46AQ96IP4 442 aaKnown RBP5.26□□□□□ -1.57
PTPN12-212ENST00000494248 DBNDD2Q9BQY9 259 aa5.26□□□□□ -1.57
PTPN12-212ENST00000494248 TGFBR3LH3BV60 316 aa5.25□□□□□ -1.57
PTPN12-212ENST00000494248 DKK1O94907 266 aa5.25□□□□□ -1.57
PTPN12-212ENST00000494248 EIF2AK2P19525 551 aaKnown RBP5.25□□□□□ -1.57
PTPN12-212ENST00000494248 USP17L5A8MUK1 530 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 LZTS3O60299 673 aaPredicted RBP5.24□□□□□ -1.57
PTPN12-212ENST00000494248 RARAP10276 462 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 ITGB5P18084 799 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 NRLP54845 237 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 GAS2L2Q8NHY3 880 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 TRIM33Q9UPN9 1127 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 CHMP3Q9Y3E7 222 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 ATAD2Q6PL18 1390 aa5.24□□□□□ -1.57
PTPN12-212ENST00000494248 SOX11P35716 441 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 WASHC4Q2M389 1173 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 ADAMTSL4Q6UY14 1074 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 KIAA1211Q6ZU35 1233 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 NFATC2IPQ8NCF5 419 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 UTP4Q969X6 686 aaKnown RBP5.23□□□□□ -1.57
PTPN12-212ENST00000494248 MYRFLQ96LU7 910 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 ALG2Q9H553 416 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 SRA1Q9HD15 236 aaKnown RBP5.23□□□□□ -1.57
PTPN12-212ENST00000494248 USP20Q9Y2K6 914 aa5.23□□□□□ -1.57
PTPN12-212ENST00000494248 M0R2N6 131 aa5.22□□□□□ -1.57
PTPN12-212ENST00000494248 IDH3AP50213 366 aa5.22□□□□□ -1.57
PTPN12-212ENST00000494248 FAM20CQ8IXL6 584 aa5.22□□□□□ -1.57
PTPN12-212ENST00000494248 STAG2Q8N3U4 1231 aa5.22□□□□□ -1.57
PTPN12-212ENST00000494248 TLR7Q9NYK1 1049 aaKnown RBP5.22□□□□□ -1.57
PTPN12-212ENST00000494248 KLK14Q9P0G3 267 aa5.22□□□□□ -1.57
PTPN12-212ENST00000494248 LOC102724428A0A0B4J2F2 783 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 WDR64B1ANS9 1081 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 SIK1P57059 783 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 HIF1AQ16665 826 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms