RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
GBP3-208ENST00000493594 EPC1Q9H2F5 836 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 CFAP45Q9UL16 551 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 MAP3K5Q99683 1374 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 A0A0D9SFI3 127 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 SMC2O95347 1197 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 PDIA4P13667 645 aaKnown RBP9.78□□□□□ -0.84
GBP3-208ENST00000493594 HSP90B1P14625 803 aaKnown RBP9.78□□□□□ -0.84
GBP3-208ENST00000493594 RAD51AP2Q09MP3 1159 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 ANKRD1Q15327 319 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 HSP90AB4PQ58FF6 505 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 TMC6Q7Z403 805 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 NBPF11Q86T75 865 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 LRRC2Q9BYS8 371 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 BOLA2Q9H3K6 86 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.78□□□□□ -0.84
GBP3-208ENST00000493594 TMEM131LA2VDJ0 1609 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 PRR36Q9H6K5 1346 aa9.78□□□□□ -0.84
GBP3-208ENST00000493594 ADCY9O60503 1353 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 KINO60870 393 aaKnown RBP9.77□□□□□ -0.84
GBP3-208ENST00000493594 NPM1P06748 294 aaKnown RBP eCLIP9.77□□□□□ -0.84
GBP3-208ENST00000493594 ST5P78524 1137 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 RNF20Q5VTR2 975 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 IL17REQ8NFR9 667 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 UBXN4Q92575 508 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 L2HGDHQ9H9P8 463 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 FEZ2Q9UHY8 353 aaPredicted RBP9.77□□□□□ -0.84
GBP3-208ENST00000493594 DNAI1Q9UI46 699 aa9.77□□□□□ -0.84
GBP3-208ENST00000493594 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.77□□□□□ -0.84
GBP3-208ENST00000493594 GNAT3A8MTJ3 354 aa9.77□□□□□ -0.85
GBP3-208ENST00000493594 KIF2AO00139 706 aaPredicted RBP9.77□□□□□ -0.85
GBP3-208ENST00000493594 ARMCX5Q6P1M9 558 aa9.77□□□□□ -0.85
GBP3-208ENST00000493594 CCDC73Q6ZRK6 1079 aa9.77□□□□□ -0.85
GBP3-208ENST00000493594 ANO10Q9NW15 660 aa9.77□□□□□ -0.85
GBP3-208ENST00000493594 ACEP12821 1306 aa9.77□□□□□ -0.85
GBP3-208ENST00000493594 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.85
GBP3-208ENST00000493594 GSDMDP57764 484 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 GUCY1B3Q02153 619 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 CCDC93Q567U6 631 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 ZNF589Q86UQ0 364 aaPredicted RBP9.76□□□□□ -0.85
GBP3-208ENST00000493594 CEP57L1Q8IYX8 460 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 FAM177A1Q8N128 213 aaPredicted RBP9.76□□□□□ -0.85
GBP3-208ENST00000493594 GPATCH3Q96I76 525 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 FSD1Q9BTV5 496 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 XPO4Q9C0E2 1151 aaKnown RBP9.76□□□□□ -0.85
GBP3-208ENST00000493594 IFNKQ9P0W0 207 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 ME1P48163 572 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 AMPHP49418 695 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 TEX35Q5T0J7 233 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 BEND3Q5T5X7 828 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 KRBA2Q6ZNG9 492 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 SMARCE1Q969G3 411 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
GBP3-208ENST00000493594 SDF4Q9BRK5 362 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 SIL1Q9H173 461 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
GBP3-208ENST00000493594 BIN1O00499 593 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 CTAGE5O15320 804 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 SFPQP23246 707 aaKnown RBP eCLIP9.75□□□□□ -0.85
GBP3-208ENST00000493594 ADD1P35611 737 aaKnown RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 GYS2P54840 703 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 SLC20A2Q08357 652 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 Q6ZUG5 572 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 FSIP1Q8NA03 581 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 LTV1Q96GA3 475 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 USP28Q96RU2 1077 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 TLR7Q9NYK1 1049 aaKnown RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 XRN1Q8IZH2 1706 aaKnown RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 USP42Q9H9J4 1324 aaKnown RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 METP08581 1390 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 A0A1B0GVL5 298 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 ZRANB2O95218 330 aaKnown RBP eCLIP9.75□□□□□ -0.85
GBP3-208ENST00000493594 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 FAM193AP78312 1265 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 PTPN21Q16825 1174 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 ISM2Q6H9L7 571 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 MNS1Q8NEH6 495 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 EAF2Q96CJ1 260 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 CARD6Q9BX69 1037 aa9.75□□□□□ -0.85
GBP3-208ENST00000493594 ZSCAN16Q9H4T2 348 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 ARGLU1Q9NWB6 273 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 C9orf78Q9NZ63 289 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 ORC3Q9UBD5 711 aaPredicted RBP9.75□□□□□ -0.85
GBP3-208ENST00000493594 DLC1Q96QB1 1528 aa9.74□□□□□ -0.85
GBP3-208ENST00000493594 CHGBP05060 677 aa9.74□□□□□ -0.85
GBP3-208ENST00000493594 DPCR1Q3MIW9 517 aa9.74□□□□□ -0.85
GBP3-208ENST00000493594 NAT10Q9H0A0 1025 aaKnown RBP9.74□□□□□ -0.85
GBP3-208ENST00000493594 OSBPL5Q9H0X9 879 aaPredicted RBP9.74□□□□□ -0.85
GBP3-208ENST00000493594 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
GBP3-208ENST00000493594 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
GBP3-208ENST00000493594 TPM4P67936 248 aa9.74□□□□□ -0.85
GBP3-208ENST00000493594 SCRN1Q12765 414 aa9.74□□□□□ -0.85
GBP3-208ENST00000493594 ZRSR1Q15695 479 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms