RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ADCY9O60503 1353 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 URI1O94763 535 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-210ENST00000493582 TBC1D8O95759 1140 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
HDAC4-210ENST00000493582 CARD6Q9BX69 1037 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 FOSBP53539 338 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 GPS2Q13227 327 aa13.68□□□□□ -0.22
HDAC4-210ENST00000493582 OSBPL5Q9H0X9 879 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-210ENST00000493582 FANCGO15287 622 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 SMC2O95347 1197 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 ETF1P62495 437 aaKnown RBP13.67□□□□□ -0.22
HDAC4-210ENST00000493582 REXO1L1PQ8IX06 675 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 BRF1Q92994 677 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 UBXN6Q9BZV1 441 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 ATP7BP35670 1465 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■□□ 18.5
HDAC4-210ENST00000493582 KCNB2Q92953 911 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 FMNL2Q96PY5 1086 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 XPO4Q9C0E2 1151 aaKnown RBP13.67□□□□□ -0.22
HDAC4-210ENST00000493582 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 CASQ1P31415 396 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-210ENST00000493582 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 ANO10Q9NW15 660 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 IFNKQ9P0W0 207 aa13.67□□□□□ -0.22
HDAC4-210ENST00000493582 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-210ENST00000493582 H3BQV1 296 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 SLC27A2O14975 620 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 SOX12O15370 315 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 GLRX3O76003 335 aaKnown RBP13.66□□□□□ -0.22
HDAC4-210ENST00000493582 LMAN1P49257 510 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 RESTQ13127 1097 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-210ENST00000493582 MLECQ14165 292 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 IFFO2Q5TF58 517 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-210ENST00000493582 TADA3O75528 432 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 NBPF7P0C2Y1 421 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-210ENST00000493582 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
HDAC4-210ENST00000493582 EVCP57679 992 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 POLA2Q14181 598 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
HDAC4-210ENST00000493582 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 ADAM21Q9UKJ8 722 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 KINO60870 393 aaKnown RBP13.65□□□□□ -0.22
HDAC4-210ENST00000493582 PSMA5P28066 241 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 CC2D1AQ6P1N0 951 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-210ENST00000493582 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 CFAP45Q9UL16 551 aa13.65□□□□□ -0.22
HDAC4-210ENST00000493582 CTAGE5O15320 804 aa13.65□□□□□ -0.23
HDAC4-210ENST00000493582 SRLQ86TD4 932 aa13.65□□□□□ -0.23
HDAC4-210ENST00000493582 MAP4K1Q92918 833 aa13.65□□□□□ -0.23
HDAC4-210ENST00000493582 PHAXQ9H814 394 aaKnown RBP13.65□□□□□ -0.23
HDAC4-210ENST00000493582 IMPACTQ9P2X3 320 aa13.65□□□□□ -0.23
HDAC4-210ENST00000493582 RRP15Q9Y3B9 282 aaKnown RBP13.65□□□□□ -0.23
HDAC4-210ENST00000493582 GTF2A1P52655 376 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-210ENST00000493582 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
HDAC4-210ENST00000493582 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
HDAC4-210ENST00000493582 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
HDAC4-210ENST00000493582 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
HDAC4-210ENST00000493582 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
HDAC4-210ENST00000493582 FBXO18Q8NFZ0 1043 aa13.64□□□□□ -0.23
HDAC4-210ENST00000493582 MYO5BQ9ULV0 1848 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-210ENST00000493582 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
HDAC4-210ENST00000493582 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
HDAC4-210ENST00000493582 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-210ENST00000493582 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
HDAC4-210ENST00000493582 ANKRD1Q15327 319 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 CCDC150Q8NCX0 1101 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 DPCR1Q3MIW9 517 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 GOLGA5Q8TBA6 731 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
HDAC4-210ENST00000493582 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 ENGASEQ8NFI3 743 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 AK7Q96M32 723 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 NAT10Q9H0A0 1025 aaKnown RBP13.62□□□□□ -0.23
HDAC4-210ENST00000493582 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 LOC102724159A0A0B4J2E5 919 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 BIN1O00499 593 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 ATP8B1O43520 1251 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 PWP2Q15269 919 aaKnown RBP13.62□□□□□ -0.23
HDAC4-210ENST00000493582 LRRFIP1Q32MZ4 808 aaKnown RBP13.62□□□□□ -0.23
HDAC4-210ENST00000493582 CLASRPQ8N2M8 674 aaKnown RBP13.62□□□□□ -0.23
HDAC4-210ENST00000493582 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
HDAC4-210ENST00000493582 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
HDAC4-210ENST00000493582 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
HDAC4-210ENST00000493582 H3BQF6 201 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms