RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
PTCD3-218ENST00000493430 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
PTCD3-218ENST00000493430 ZFATQ9P243 1243 aa6.86□□□□□ -1.31
PTCD3-218ENST00000493430 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
PTCD3-218ENST00000493430 OPLAHO14841 1288 aa6.85□□□□□ -1.31
PTCD3-218ENST00000493430 ITGB7P26010 798 aa6.85□□□□□ -1.31
PTCD3-218ENST00000493430 NRG1Q02297 640 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-218ENST00000493430 NKAPLQ5M9Q1 402 aa6.85□□□□□ -1.31
PTCD3-218ENST00000493430 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-218ENST00000493430 FRRS1LQ9P0K9 344 aa6.85□□□□□ -1.31
PTCD3-218ENST00000493430 LRFN2Q9ULH4 789 aa6.85□□□□□ -1.31
PTCD3-218ENST00000493430 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
PTCD3-218ENST00000493430 ZBTB42B2RXF5 422 aa6.84□□□□□ -1.31
PTCD3-218ENST00000493430 SELPP16109 830 aa6.84□□□□□ -1.31
PTCD3-218ENST00000493430 FKBP5Q13451 457 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-218ENST00000493430 ELMSAN1Q6PJG2 1045 aa6.84□□□□□ -1.31
PTCD3-218ENST00000493430 TREML1Q86YW5 311 aa6.84□□□□□ -1.31
PTCD3-218ENST00000493430 Q8N3U1 123 aa6.84□□□□□ -1.31
PTCD3-218ENST00000493430 LENG1Q96BZ8 264 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-218ENST00000493430 PRIMPOLQ96LW4 560 aa6.84□□□□□ -1.31
PTCD3-218ENST00000493430 EGFRP00533 1210 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 GPLD1P80108 840 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 MLLT1Q03111 559 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-218ENST00000493430 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
PTCD3-218ENST00000493430 ADGRE1Q14246 886 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 MBTPS1Q14703 1052 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 COX20Q5RI15 118 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 MSL1Q68DK7 614 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 ILDR2Q71H61 639 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 RGL4Q8IZJ4 473 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 FMR1NBQ8N0W7 255 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-218ENST00000493430 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
PTCD3-218ENST00000493430 TTC9Q92623 222 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 USP20Q9Y2K6 914 aa6.83□□□□□ -1.32
PTCD3-218ENST00000493430 PRMT3O60678 531 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 XYLBO75191 536 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 GRIK5Q16478 980 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 DTWD1Q8N5C7 304 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 LPIN3Q9BQK8 851 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 TLR7Q9NYK1 1049 aaKnown RBP6.82□□□□□ -1.32
PTCD3-218ENST00000493430 USP21Q9UK80 565 aa6.82□□□□□ -1.32
PTCD3-218ENST00000493430 DYRK3O43781 588 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 BRD2P25440 801 aaKnown RBP6.81□□□□□ -1.32
PTCD3-218ENST00000493430 NRLP54845 237 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 OCLNQ16625 522 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 ZMYM1Q5SVZ6 1142 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 TXNRD3Q86VQ6 643 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
PTCD3-218ENST00000493430 PSAPP07602 524 aa6.8□□□□□ -1.32
PTCD3-218ENST00000493430 FAM69CQ0P6D2 419 aa6.8□□□□□ -1.32
PTCD3-218ENST00000493430 C16orf46Q6P387 395 aa6.8□□□□□ -1.32
PTCD3-218ENST00000493430 HFE2Q6ZVN8 426 aa6.8□□□□□ -1.32
PTCD3-218ENST00000493430 FBXO11Q86XK2 927 aa6.8□□□□□ -1.32
PTCD3-218ENST00000493430 COL26A1Q96A83 441 aa6.8□□□□□ -1.32
PTCD3-218ENST00000493430 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
PTCD3-218ENST00000493430 H2AFB1P0C5Y9 115 aa6.79□□□□□ -1.32
PTCD3-218ENST00000493430 H2AFB2P0C5Z0 115 aa6.79□□□□□ -1.32
PTCD3-218ENST00000493430 EIF2AK2P19525 551 aaKnown RBP6.79□□□□□ -1.32
PTCD3-218ENST00000493430 SRPK2P78362 688 aaKnown RBP6.79□□□□□ -1.32
PTCD3-218ENST00000493430 PLAURQ03405 335 aa6.79□□□□□ -1.32
PTCD3-218ENST00000493430 STK32AQ8WU08 396 aa6.79□□□□□ -1.32
PTCD3-218ENST00000493430 SAP130Q9H0E3 1048 aa6.79□□□□□ -1.32
PTCD3-218ENST00000493430 KCNMB2Q9Y691 235 aa6.79□□□□□ -1.32
PTCD3-218ENST00000493430 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-218ENST00000493430 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
PTCD3-218ENST00000493430 MMP20O60882 483 aa6.78□□□□□ -1.32
PTCD3-218ENST00000493430 ATG7O95352 703 aa6.78□□□□□ -1.32
PTCD3-218ENST00000493430 SIK1P57059 783 aa6.78□□□□□ -1.32
PTCD3-218ENST00000493430 ETFBKMTQ8IXQ9 262 aa6.78□□□□□ -1.32
PTCD3-218ENST00000493430 J3QW42 95 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
PTCD3-218ENST00000493430 GHRHP01286 108 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 SOX18P35713 384 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 PRSS36Q5K4E3 855 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 NLRP13Q86W25 1043 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 PIK3R5Q8WYR1 880 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 TP53INP1Q96A56 240 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 PLD4Q96BZ4 506 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 RBSNQ9H1K0 784 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 FAM13BQ9NYF5 915 aa6.77□□□□□ -1.33
PTCD3-218ENST00000493430 CXXC1Q9P0U4 656 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-218ENST00000493430 NAA30Q147X3 362 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-218ENST00000493430 MKNK1Q9BUB5 465 aa6.76□□□□□ -1.33
PTCD3-218ENST00000493430 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
PTCD3-218ENST00000493430 UBAP1LF5GYI3 381 aa6.75□□□□□ -1.33
PTCD3-218ENST00000493430 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-218ENST00000493430 TMEM164Q5U3C3 297 aa6.75□□□□□ -1.33
PTCD3-218ENST00000493430 GDF6Q6KF10 455 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-218ENST00000493430 CAPN12Q6ZSI9 719 aa6.75□□□□□ -1.33
PTCD3-218ENST00000493430 WFDC12Q8WWY7 111 aa6.75□□□□□ -1.33
PTCD3-218ENST00000493430 NSUN5Q96P11 429 aaKnown RBP6.75□□□□□ -1.33
PTCD3-218ENST00000493430 FNDC3AQ9Y2H6 1198 aaKnown RBP6.75□□□□□ -1.33
PTCD3-218ENST00000493430 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
PTCD3-218ENST00000493430 DEAF1O75398 565 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-218ENST00000493430 IREB2P48200 963 aaKnown RBP6.74□□□□□ -1.33
PTCD3-218ENST00000493430 TRIP4Q15650 581 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms