RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 GOPCQ9HD26 462 aa18.71■□□□□ 0.59
BRAT1-206ENST00000493232 EXOC1Q9NV70 894 aa18.71■□□□□ 0.59
BRAT1-206ENST00000493232 SAMM50Q9Y512 469 aa18.71■□□□□ 0.59
BRAT1-206ENST00000493232 GOLGA6L10A0A0M3HER8 536 aa18.71■□□□□ 0.59
BRAT1-206ENST00000493232 CHPF2Q9P2E5 772 aa18.71■□□□□ 0.59
BRAT1-206ENST00000493232 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
BRAT1-206ENST00000493232 XAGE3Q8WTP9 111 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 RRP9O43818 475 aaKnown RBP18.7■□□□□ 0.58
BRAT1-206ENST00000493232 TSPY3P0CV98 308 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 TSPY8P0CW00 308 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 CYP7A1P22680 504 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 USP37Q86T82 979 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 TBC1D32Q96NH3 1257 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 BRF1Q92994 677 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 LARP6Q9BRS8 491 aaKnown RBP18.7■□□□□ 0.58
BRAT1-206ENST00000493232 HDAC9Q9UKV0 1011 aa18.7■□□□□ 0.58
BRAT1-206ENST00000493232 SETDB2Q96T68 719 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 STX8Q9UNK0 236 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 TMCO5BA8MYB1 307 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 PRC1O43663 620 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 STAMBPO95630 424 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 KSR2Q6VAB6 950 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 KCNG4Q8TDN1 519 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 FERMT1Q9BQL6 677 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 GRM8O00222 908 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 DNA2P51530 1060 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 NLRP3Q96P20 1036 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 NUP160Q12769 1436 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
BRAT1-206ENST00000493232 IFIT1BQ5T764 474 aaKnown RBP18.69■□□□□ 0.58
BRAT1-206ENST00000493232 TRIM47Q96LD4 638 aa18.69■□□□□ 0.58
BRAT1-206ENST00000493232 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 SYKP43405 635 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 SLC4A4Q9Y6R1 1079 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 RTN1Q16799 776 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 MCMDC2Q4G0Z9 681 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 SPAG1Q07617 926 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 KLHL40Q2TBA0 621 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 COPS6Q7L5N1 327 aa18.68■□□□□ 0.58
BRAT1-206ENST00000493232 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
BRAT1-206ENST00000493232 PAXIP1Q6ZW49 1069 aaPredicted RBP18.67■□□□□ 0.58
BRAT1-206ENST00000493232 TMEM87AQ8NBN3 555 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 PPIP5K1Q6PFW1 1433 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 CTAGE1Q96RT6 745 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 PANK2Q9BZ23 570 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 ADCY5O95622 1261 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 SPECC1Q5M775 1068 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 ALG1Q9BT22 464 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 N4BP3O15049 544 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 ANXA1P04083 346 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 SDSP20132 328 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 HLTFQ14527 1009 aaKnown RBP eCLIP18.67■□□□□ 0.58
BRAT1-206ENST00000493232 MEIS3Q99687 375 aa18.67■□□□□ 0.58
BRAT1-206ENST00000493232 TRMT1Q9NXH9 659 aaKnown RBP18.67■□□□□ 0.58
BRAT1-206ENST00000493232 PDE1AP54750 535 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 TMX3Q96JJ7 454 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
BRAT1-206ENST00000493232 NOP2P46087 812 aaKnown RBP18.66■□□□□ 0.58
BRAT1-206ENST00000493232 NAA16Q6N069 864 aaPredicted RBP18.66■□□□□ 0.58
BRAT1-206ENST00000493232 MICALCLQ6ZW33 695 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 ZNF804AQ7Z570 1209 aa18.66■□□□□ 0.58
BRAT1-206ENST00000493232 SNW1Q13573 536 aaKnown RBP18.65■□□□□ 0.58
BRAT1-206ENST00000493232 DDX12PQ92771 950 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 BICD1Q96G01 975 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 PLVAPQ9BX97 442 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 RBM8AQ9Y5S9 174 aaKnown RBP18.65■□□□□ 0.58
BRAT1-206ENST00000493232 TEX14Q8IWB6 1497 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 GNAT2P19087 354 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 RAB11FIP4Q86YS3 637 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
BRAT1-206ENST00000493232 C16orf45Q96MC5 204 aaPredicted RBP18.65■□□□□ 0.58
BRAT1-206ENST00000493232 IGHDP01880 384 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 CALM1P0DP23 149 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 CALM2P0DP24 149 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 CALM3P0DP25 149 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 SKAP1Q86WV1 359 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 ESYT1Q9BSJ8 1104 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 UTP14AQ9BVJ6 771 aaKnown RBP18.64■□□□□ 0.58
BRAT1-206ENST00000493232 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.58
BRAT1-206ENST00000493232 STAT6P42226 847 aa18.64■□□□□ 0.57
BRAT1-206ENST00000493232 DRC1Q96MC2 740 aa18.64■□□□□ 0.57
BRAT1-206ENST00000493232 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-206ENST00000493232 ERICH4A6NGS2 130 aa18.64■□□□□ 0.57
BRAT1-206ENST00000493232 AKR1B10O60218 316 aa18.64■□□□□ 0.57
BRAT1-206ENST00000493232 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-206ENST00000493232 ACTN2P35609 894 aa18.64■□□□□ 0.57
BRAT1-206ENST00000493232 RRAGBQ5VZM2 374 aa18.64■□□□□ 0.57
BRAT1-206ENST00000493232 MRPL50Q8N5N7 158 aaKnown RBP18.64■□□□□ 0.57
BRAT1-206ENST00000493232 PUS7Q96PZ0 661 aaKnown RBP18.64■□□□□ 0.57
BRAT1-206ENST00000493232 PRPF4BQ13523 1007 aaKnown RBP18.63■□□□□ 0.57
BRAT1-206ENST00000493232 OGFOD1Q8N543 542 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms