RNA–Protein interactions for RNA: ENST00000493060.5

NVL-222, Transcript of nuclear VCP-like, human

TSL 2

Gene NVL, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-222	ENST00000493060	A1BG	P04217	495 aa		11.41	□□□□□ -0.58
NVL-222	ENST00000493060	VEGFA	P15692	232 aa	Predicted RBP	11.41	□□□□□ -0.58
NVL-222	ENST00000493060	RALBP1	Q15311	655 aa		11.41	□□□□□ -0.58
NVL-222	ENST00000493060	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.41	□□□□□ -0.58
NVL-222	ENST00000493060	ZBED2	Q9BTP6	218 aa		11.41	□□□□□ -0.58
NVL-222	ENST00000493060	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.41	□□□□□ -0.58
NVL-222	ENST00000493060	LTBP3	Q9NS15	1303 aa		11.4	□□□□□ -0.58
NVL-222	ENST00000493060	C21orf2	O43822	256 aa		11.4	□□□□□ -0.58
NVL-222	ENST00000493060	PDE6B	P35913	854 aa		11.4	□□□□□ -0.58
NVL-222	ENST00000493060	CNGB1	Q14028	1251 aa	Predicted RBP	11.4	□□□□□ -0.58
NVL-222	ENST00000493060	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
NVL-222	ENST00000493060	FMNL2	Q96PY5	1086 aa		11.4	□□□□□ -0.58
NVL-222	ENST00000493060	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.4	□□□□□ -0.58
NVL-222	ENST00000493060	RSPH6A	Q9H0K4	717 aa		11.4	□□□□□ -0.58
NVL-222	ENST00000493060	TAF1	P21675	1872 aa		11.4	□□□□□ -0.59
NVL-222	ENST00000493060	PRAMEF22	A3QJZ6	481 aa		11.39	□□□□□ -0.59
NVL-222	ENST00000493060	PRKAR2B	P31323	418 aa		11.39	□□□□□ -0.59
NVL-222	ENST00000493060	PIP4K2A	P48426	406 aa	Predicted RBP	11.39	□□□□□ -0.59
NVL-222	ENST00000493060	LTBP1	Q14766	1721 aa		11.39	□□□□□ -0.59
NVL-222	ENST00000493060	CNBD1	Q8NA66	436 aa		11.39	□□□□□ -0.59
NVL-222	ENST00000493060	SRGN	P10124	158 aa		11.38	□□□□□ -0.59
NVL-222	ENST00000493060	PRPF40B	Q6NWY9	871 aa	Known RBP	11.38	□□□□□ -0.59
NVL-222	ENST00000493060	ADAM33	Q9BZ11	813 aa		11.38	□□□□□ -0.59
NVL-222	ENST00000493060	PDZRN3	Q9UPQ7	1066 aa		11.38	□□□□□ -0.59
NVL-222	ENST00000493060	USP16	Q9Y5T5	823 aa		11.38	□□□□□ -0.59
NVL-222	ENST00000493060	SNED1	Q8TER0	1413 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	BTBD11	A6QL63	1104 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	EVI5	O60447	810 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	ERFE	Q4G0M1	354 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	STYK1	Q6J9G0	422 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	DZIP3	Q86Y13	1208 aa	Known RBP	11.37	□□□□□ -0.59
NVL-222	ENST00000493060	SETDB2	Q96T68	719 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	TAOK3	Q9H2K8	898 aa		11.37	□□□□□ -0.59
NVL-222	ENST00000493060	COL4A5	P29400	1685 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	THSD7B	Q9C0I4	1608 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	PTPN5	P54829	565 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	ST5	P78524	1137 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	MFSD10	Q14728	455 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	THSD4	Q6ZMP0	1018 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	MCM10	Q7L590	875 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	C7orf43	Q8WVR3	580 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	CNKSR1	Q969H4	720 aa		11.36	□□□□□ -0.59
NVL-222	ENST00000493060	RYDEN	Q9NUL5	291 aa	Known RBP	11.36	□□□□□ -0.59
NVL-222	ENST00000493060	NBPF26	B4DH59	902 aa		11.35	□□□□□ -0.59
NVL-222	ENST00000493060	DDN	O94850	711 aa	Predicted RBP	11.35	□□□□□ -0.59
NVL-222	ENST00000493060	HSPA1A	P0DMV8	641 aa	Known RBP	11.35	□□□□□ -0.59
NVL-222	ENST00000493060	HSPA1B	P0DMV9	641 aa	Known RBP	11.35	□□□□□ -0.59
NVL-222	ENST00000493060	NBPF10	Q6P3W6	841 aa	Known RBP	11.35	□□□□□ -0.59
NVL-222	ENST00000493060	NBPF15	Q8N660	670 aa		11.35	□□□□□ -0.59
NVL-222	ENST00000493060	MASTL	Q96GX5	879 aa		11.35	□□□□□ -0.59
NVL-222	ENST00000493060	MRS2	Q9HD23	443 aa		11.35	□□□□□ -0.59
NVL-222	ENST00000493060	PTPRE	P23469	700 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	PDE4A	P27815	886 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	DCTN1	Q14203	1278 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	OLFM4	Q6UX06	510 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	CLEC4G	Q6UXB4	293 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	EMILIN3	Q9NT22	766 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	DDX60	Q8IY21	1712 aa	Known RBP	11.34	□□□□□ -0.59
NVL-222	ENST00000493060	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.34	□□□□□ -0.59
NVL-222	ENST00000493060	ZNF541	Q9H0D2	1346 aa		11.34	□□□□□ -0.59
NVL-222	ENST00000493060	ABCC12	Q96J65	1359 aa		11.33	□□□□□ -0.6
NVL-222	ENST00000493060	KLRG2	A4D1S0	409 aa	Predicted RBP	11.33	□□□□□ -0.6
NVL-222	ENST00000493060	NPHP1	O15259	732 aa		11.33	□□□□□ -0.6
NVL-222	ENST00000493060	SNRPA1	P09661	255 aa	Known RBP	11.33	□□□□□ -0.6
NVL-222	ENST00000493060	PPP2R1A	P30153	589 aa		11.33	□□□□□ -0.6
NVL-222	ENST00000493060	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.33	□□□□□ -0.6
NVL-222	ENST00000493060	CFAP53	Q96M91	514 aa		11.33	□□□□□ -0.6
NVL-222	ENST00000493060	LRRC37A	A6NMS7	1700 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.32	□□□□□ -0.6
NVL-222	ENST00000493060	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
NVL-222	ENST00000493060	SOGA3	Q5TF21	947 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	NPM2	Q86SE8	214 aa	Known RBP	11.32	□□□□□ -0.6
NVL-222	ENST00000493060	TNS4	Q8IZW8	715 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	ZDHHC16	Q969W1	377 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	ZNF652	Q9Y2D9	606 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	RIC1	Q4ADV7	1423 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	POLR2A	P24928	1970 aa	Known RBP	11.32	□□□□□ -0.6
NVL-222	ENST00000493060	PASK	Q96RG2	1323 aa		11.32	□□□□□ -0.6
NVL-222	ENST00000493060	NPR1	P16066	1061 aa		11.31	□□□□□ -0.6
NVL-222	ENST00000493060	HLF	Q16534	295 aa		11.31	□□□□□ -0.6
NVL-222	ENST00000493060	CCDC93	Q567U6	631 aa		11.31	□□□□□ -0.6
NVL-222	ENST00000493060	RTF1	Q92541	710 aa	Known RBP	11.31	□□□□□ -0.6
NVL-222	ENST00000493060	LARP6	Q9BRS8	491 aa	Known RBP	11.31	□□□□□ -0.6
NVL-222	ENST00000493060	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
NVL-222	ENST00000493060	CNTNAP1	P78357	1384 aa		11.3	□□□□□ -0.6
NVL-222	ENST00000493060	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
NVL-222	ENST00000493060	DDX27	Q96GQ7	796 aa	Known RBP	11.3	□□□□□ -0.6
NVL-222	ENST00000493060	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.3	□□□□□ -0.6
NVL-222	ENST00000493060	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.3	□□□□□ -0.6
NVL-222	ENST00000493060	MKRN1	Q9UHC7	482 aa	Known RBP	11.3	□□□□□ -0.6
NVL-222	ENST00000493060	NUDC	Q9Y266	331 aa		11.3	□□□□□ -0.6
NVL-222	ENST00000493060	IQCA1L	A6NCM1	817 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	FAM177B	A6PVY3	158 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	HTATSF1	O43719	755 aa	Known RBP	11.29	□□□□□ -0.6
NVL-222	ENST00000493060	CRY2	Q49AN0	593 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	TPTE2	Q6XPS3	522 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	SLC51A	Q86UW1	340 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	LDHD	Q86WU2	507 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	MIS18A	Q9NYP9	233 aa		11.29	□□□□□ -0.6
NVL-222	ENST00000493060	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms