RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 MPNDQ8N594 471 aa12.45□□□□□ -0.42
MCF2L2-213ENST00000492331 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
MCF2L2-213ENST00000492331 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
MCF2L2-213ENST00000492331 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
MCF2L2-213ENST00000492331 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
MCF2L2-213ENST00000492331 TAF1P21675 1872 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 ZNF541Q9H0D2 1346 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 VAMP4O75379 141 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 PCCAP05165 728 aaPredicted RBP12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 APLP1P51693 650 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 SF3B3Q15393 1217 aaKnown RBP12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
MCF2L2-213ENST00000492331 IQCA1LA6NCM1 817 aa12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 FZD9O00144 591 aa12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 FLIIQ13045 1269 aa12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 AOC3Q16853 763 aa12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
MCF2L2-213ENST00000492331 PDE8AO60658 829 aa12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 SNED1Q8TER0 1413 aa12.42□□□□□ -0.42
MCF2L2-213ENST00000492331 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
MCF2L2-213ENST00000492331 GPC2Q8N158 579 aa12.41□□□□□ -0.42
MCF2L2-213ENST00000492331 DNAAF4Q8WXU2 420 aa12.41□□□□□ -0.42
MCF2L2-213ENST00000492331 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
MCF2L2-213ENST00000492331 HACL1Q9UJ83 578 aa12.41□□□□□ -0.42
MCF2L2-213ENST00000492331 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 HTRA3P83110 453 aa12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 VPS33BQ9H267 617 aa12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
MCF2L2-213ENST00000492331 COL4A5P29400 1685 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 EPHX2P34913 555 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 SCN4AP35499 1836 aa12.39□□□□□ -0.43
MCF2L2-213ENST00000492331 CDHR2Q9BYE9 1310 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 F6X3S4 739 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 CCER2I3L3R5 266 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 GPSM2P81274 684 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 GCKRQ14397 625 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 ANKRD18AQ8IVF6 992 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 ANKIB1Q9P2G1 1089 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
MCF2L2-213ENST00000492331 G3V3G9 751 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 H7C1W4 665 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 RAD17O75943 681 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 CTSWP56202 376 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 CXCL9Q07325 125 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 EYA3Q99504 573 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
MCF2L2-213ENST00000492331 COL4A1P02462 1669 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 E9PSI1 815 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 EPS15P42566 896 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 TNIP1Q15025 636 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 ZC3H12CQ9C0D7 883 aaKnown RBP12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 GREM2Q9H772 168 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 DBNDD1Q9H9R9 158 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 POLLQ9UGP5 575 aa12.36□□□□□ -0.43
MCF2L2-213ENST00000492331 LRRC37AA6NMS7 1700 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 UFL1O94874 794 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 DNAJC5GQ8N7S2 189 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 TBC1D16Q8TBP0 767 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 GGA1Q9UJY5 639 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 CEP350Q5VT06 3117 aa12.35□□□□□ -0.43
MCF2L2-213ENST00000492331 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
MCF2L2-213ENST00000492331 SCNN1DP51172 638 aa12.34□□□□□ -0.43
MCF2L2-213ENST00000492331 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
MCF2L2-213ENST00000492331 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
MCF2L2-213ENST00000492331 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
MCF2L2-213ENST00000492331 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms