RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 CBX1P83916 185 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 UBE3BQ7Z3V4 1068 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 TTC14Q96N46 770 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
SNED1-211ENST00000491761 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 A0A087WZG4 1122 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
SNED1-211ENST00000491761 OFD1O75665 1012 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 GCKRQ14397 625 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
SNED1-211ENST00000491761 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
SNED1-211ENST00000491761 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
SNED1-211ENST00000491761 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
SNED1-211ENST00000491761 CPLX1O14810 134 aa12.68□□□□□ -0.38
SNED1-211ENST00000491761 SLC27A2O14975 620 aa12.68□□□□□ -0.38
SNED1-211ENST00000491761 CCDC192P0DO97 292 aa12.68□□□□□ -0.38
SNED1-211ENST00000491761 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
SNED1-211ENST00000491761 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
SNED1-211ENST00000491761 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
SNED1-211ENST00000491761 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 MNS1Q8NEH6 495 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 CPLX2Q6PUV4 134 aaKnown RBP12.67□□□□□ -0.38
SNED1-211ENST00000491761 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 SASH1O94885 1247 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
SNED1-211ENST00000491761 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 TRERF1Q96PN7 1200 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
SNED1-211ENST00000491761 FER1L4A9Z1Z3 1794 aa12.67□□□□□ -0.38
SNED1-211ENST00000491761 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
SNED1-211ENST00000491761 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
SNED1-211ENST00000491761 ERBB3P21860 1342 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 PIP4K2AP48426 406 aaPredicted RBP12.66□□□□□ -0.38
SNED1-211ENST00000491761 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 MAP4K1Q92918 833 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 PHKG2P15735 406 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 PDILTQ8N807 584 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
SNED1-211ENST00000491761 ERICH4A6NGS2 130 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 ME3Q16798 604 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 LRRFIP1Q32MZ4 808 aaKnown RBP12.65□□□□□ -0.38
SNED1-211ENST00000491761 TMEM87AQ8NBN3 555 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
SNED1-211ENST00000491761 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 NWD1Q149M9 1564 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 TFCP2Q12800 502 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 NECTIN1Q15223 517 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 CACNA1FO60840 1977 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 NEK1Q96PY6 1258 aa12.65□□□□□ -0.38
SNED1-211ENST00000491761 FAM208AQ9UK61 1670 aaKnown RBP12.65□□□□□ -0.38
SNED1-211ENST00000491761 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 LARGE1O95461 756 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 ADCY5O95622 1261 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 TLR7Q9NYK1 1049 aaKnown RBP12.64□□□□□ -0.39
SNED1-211ENST00000491761 XRN1Q8IZH2 1706 aaKnown RBP12.64□□□□□ -0.39
SNED1-211ENST00000491761 IGKV5-2P06315 115 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
SNED1-211ENST00000491761 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 TNMDQ9H2S6 317 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNED1-211ENST00000491761 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 DTNBO60941 627 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 CAMK4Q16566 473 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
SNED1-211ENST00000491761 ATP5JP18859 108 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 LMBR1LQ6UX01 489 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 TPCN1Q9ULQ1 816 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 OVOS2A0A0G2JMS6 1433 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
SNED1-211ENST00000491761 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 COPRSQ9NQ92 184 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
SNED1-211ENST00000491761 LRRC37A3O60309 1634 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 SMC2O95347 1197 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
SNED1-211ENST00000491761 TRDNQ13061 729 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
SNED1-211ENST00000491761 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
SNED1-211ENST00000491761 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms