RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 LMBR1LQ6UX01 489 aa27.11■■□□□ 1.93
VCPKMT-204ENST00000491402 CTSWP56202 376 aa27.1■■□□□ 1.93
VCPKMT-204ENST00000491402 KLHL34Q8N239 644 aa27.1■■□□□ 1.93
VCPKMT-204ENST00000491402 SSH3Q8TE77 659 aa27.1■■□□□ 1.93
VCPKMT-204ENST00000491402 KDM2BQ8NHM5 1336 aa27.1■■□□□ 1.93
VCPKMT-204ENST00000491402 POLA2Q14181 598 aa27.09■■□□□ 1.93
VCPKMT-204ENST00000491402 SLC10A5Q5PT55 438 aa27.09■■□□□ 1.93
VCPKMT-204ENST00000491402 CSF1RP07333 972 aa27.08■■□□□ 1.93
VCPKMT-204ENST00000491402 TTLL11Q8NHH1 800 aa27.07■■□□□ 1.92
VCPKMT-204ENST00000491402 CHMP3Q9Y3E7 222 aa27.07■■□□□ 1.92
VCPKMT-204ENST00000491402 TNRC6CQ9HCJ0 1690 aaKnown RBP27.07■■□□□ 1.92
VCPKMT-204ENST00000491402 CENPQQ7L2Z9 268 aaPredicted RBP27.07■■□□□ 1.92
VCPKMT-204ENST00000491402 ST5P78524 1137 aa27.05■■□□□ 1.92
VCPKMT-204ENST00000491402 RIC1Q4ADV7 1423 aa27.05■■□□□ 1.92
VCPKMT-204ENST00000491402 FAM161AQ3B820 660 aa27.04■■□□□ 1.92
VCPKMT-204ENST00000491402 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
VCPKMT-204ENST00000491402 FHDC1Q9C0D6 1143 aaPredicted RBP27.04■■□□□ 1.92
VCPKMT-204ENST00000491402 LRP5O75197 1615 aa27.04■■□□□ 1.92
VCPKMT-204ENST00000491402 C3orf67Q6ZVT6 689 aa27.03■■□□□ 1.92
VCPKMT-204ENST00000491402 GREM2Q9H772 168 aa27.03■■□□□ 1.92
VCPKMT-204ENST00000491402 DCTPP1Q9H773 170 aa27.03■■□□□ 1.92
VCPKMT-204ENST00000491402 ANKRD31Q8N7Z5 1873 aa27.03■■□□□ 1.92
VCPKMT-204ENST00000491402 RFX5P48382 616 aaPredicted RBP27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 SMC5Q8IY18 1101 aa27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 NLRP3Q96P20 1036 aa27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 C10orf71Q711Q0 1435 aa27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 CCDC152Q4G0S7 254 aa27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 BRIP1Q9BX63 1249 aa27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 CD2APQ9Y5K6 639 aa27.02■■□□□ 1.92
VCPKMT-204ENST00000491402 SF3B3Q15393 1217 aaKnown RBP27.01■■□□□ 1.91
VCPKMT-204ENST00000491402 CCDC57Q2TAC2 916 aa27.01■■□□□ 1.91
VCPKMT-204ENST00000491402 GCC1Q96CN9 775 aa27.01■■□□□ 1.91
VCPKMT-204ENST00000491402 IFIT5Q13325 482 aaKnown RBP27■■□□□ 1.91
VCPKMT-204ENST00000491402 KLHDC4Q8TBB5 520 aa27■■□□□ 1.91
VCPKMT-204ENST00000491402 PA2G4Q9UQ80 394 aaKnown RBP27■■□□□ 1.91
VCPKMT-204ENST00000491402 RTL9Q8NET4 1388 aa27■■□□□ 1.91
VCPKMT-204ENST00000491402 ITGA6P23229 1130 aa26.99■■□□□ 1.91
VCPKMT-204ENST00000491402 PTPN12Q05209 780 aaKnown RBP26.99■■□□□ 1.91
VCPKMT-204ENST00000491402 EXOC6BQ9Y2D4 811 aa26.99■■□□□ 1.91
VCPKMT-204ENST00000491402 SYT17Q9BSW7 474 aa26.99■■□□□ 1.91
VCPKMT-204ENST00000491402 COPRSQ9NQ92 184 aa26.99■■□□□ 1.91
VCPKMT-204ENST00000491402 SURF6O75683 361 aaKnown RBP26.98■■□□□ 1.91
VCPKMT-204ENST00000491402 ANKRD18BA2A2Z9 1011 aa26.97■■□□□ 1.91
VCPKMT-204ENST00000491402 NOP58Q9Y2X3 529 aaKnown RBP26.97■■□□□ 1.91
VCPKMT-204ENST00000491402 PDE6BP35913 854 aa26.97■■□□□ 1.91
VCPKMT-204ENST00000491402 NLGN2Q8NFZ4 835 aa26.97■■□□□ 1.91
VCPKMT-204ENST00000491402 KIF13BQ9NQT8 1826 aa26.96■■□□□ 1.91
VCPKMT-204ENST00000491402 TAF1P21675 1872 aa26.96■■□□□ 1.91
VCPKMT-204ENST00000491402 A0A0G2JLW4 131 aa26.96■■□□□ 1.91
VCPKMT-204ENST00000491402 CHRNA5P30532 468 aa26.96■■□□□ 1.91
VCPKMT-204ENST00000491402 ZNF594Q96JF6 807 aaPredicted RBP26.96■■□□□ 1.91
VCPKMT-204ENST00000491402 CRY2Q49AN0 593 aa26.95■■□□□ 1.9
VCPKMT-204ENST00000491402 SIL1Q9H173 461 aa26.95■■□□□ 1.9
VCPKMT-204ENST00000491402 SEC31BQ9NQW1 1179 aa26.95■■□□□ 1.9
VCPKMT-204ENST00000491402 DPEP1P16444 411 aa26.94■■□□□ 1.9
VCPKMT-204ENST00000491402 TGFB2P61812 414 aa26.94■■□□□ 1.9
VCPKMT-204ENST00000491402 C2CD5Q86YS7 1000 aa26.94■■□□□ 1.9
VCPKMT-204ENST00000491402 SPEF2Q9C093 1822 aa26.94■■□□□ 1.9
VCPKMT-204ENST00000491402 HSP90AB4PQ58FF6 505 aa26.94■■□□□ 1.9
VCPKMT-204ENST00000491402 TAF7LQ5H9L4 462 aa26.94■■□□□ 1.9
VCPKMT-204ENST00000491402 COL4A1P02462 1669 aa26.93■■□□□ 1.9
VCPKMT-204ENST00000491402 KLRG2A4D1S0 409 aaPredicted RBP26.93■■□□□ 1.9
VCPKMT-204ENST00000491402 H0YIN7 160 aa26.93■■□□□ 1.9
VCPKMT-204ENST00000491402 APBB1O00213 710 aa26.93■■□□□ 1.9
VCPKMT-204ENST00000491402 COL11A2P13942 1736 aaPredicted RBP26.92■■□□□ 1.9
VCPKMT-204ENST00000491402 G3BP1Q13283 466 aaKnown RBP eCLIP26.92■■□□□ 1.9
VCPKMT-204ENST00000491402 OS9Q13438 667 aaPredicted RBP26.92■■□□□ 1.9
VCPKMT-204ENST00000491402 RAB11FIP3O75154 756 aa26.91■■□□□ 1.9
VCPKMT-204ENST00000491402 CDC5LQ99459 802 aaKnown RBP26.91■■□□□ 1.9
VCPKMT-204ENST00000491402 SRGNP10124 158 aa26.9■■□□□ 1.9
VCPKMT-204ENST00000491402 KCNA3P22001 575 aa26.9■■□□□ 1.9
VCPKMT-204ENST00000491402 NUCB1Q02818 461 aa26.9■■□□□ 1.9
VCPKMT-204ENST00000491402 ANKRD45Q5TZF3 282 aa26.9■■□□□ 1.9
VCPKMT-204ENST00000491402 RPGRQ92834 1020 aaKnown RBP26.9■■□□□ 1.9
VCPKMT-204ENST00000491402 EYA2O00167 538 aa26.89■■□□□ 1.9
VCPKMT-204ENST00000491402 DDX46Q7L014 1031 aaKnown RBP26.89■■□□□ 1.9
VCPKMT-204ENST00000491402 FBXO3Q9UK99 471 aa26.89■■□□□ 1.9
VCPKMT-204ENST00000491402 WWC3Q9ULE0 1092 aa26.89■■□□□ 1.9
VCPKMT-204ENST00000491402 PDZRN3Q9UPQ7 1066 aa26.89■■□□□ 1.9
VCPKMT-204ENST00000491402 CIAO1O76071 339 aa26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 LRRC24Q50LG9 513 aa26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 ATG9AQ7Z3C6 839 aa26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 ERC1Q8IUD2 1116 aa26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 ZNF622Q969S3 477 aaKnown RBP eCLIP26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 PUS3Q9BZE2 481 aaKnown RBP26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 LRRCC1Q9C099 1032 aa26.89■■□□□ 1.89
VCPKMT-204ENST00000491402 LDHAL6AQ6ZMR3 332 aa26.88■■□□□ 1.89
VCPKMT-204ENST00000491402 RHPN1Q8TCX5 695 aa26.88■■□□□ 1.89
VCPKMT-204ENST00000491402 KIF1BPQ96EK5 621 aa26.88■■□□□ 1.89
VCPKMT-204ENST00000491402 KIAA1551Q9HCM1 1747 aa26.88■■□□□ 1.89
VCPKMT-204ENST00000491402 SASH1O94885 1247 aa26.87■■□□□ 1.89
VCPKMT-204ENST00000491402 IGHMBP2P38935 993 aaKnown RBP26.87■■□□□ 1.89
VCPKMT-204ENST00000491402 CHD1LQ86WJ1 897 aa26.87■■□□□ 1.89
VCPKMT-204ENST00000491402 ANKRD18AQ8IVF6 992 aa26.87■■□□□ 1.89
VCPKMT-204ENST00000491402 CELF1Q92879 486 aaKnown RBP26.87■■□□□ 1.89
VCPKMT-204ENST00000491402 NPR1P16066 1061 aa26.86■■□□□ 1.89
VCPKMT-204ENST00000491402 IL15P40933 162 aaPredicted RBP26.86■■□□□ 1.89
VCPKMT-204ENST00000491402 MASTLQ96GX5 879 aa26.86■■□□□ 1.89
VCPKMT-204ENST00000491402 MPHOSPH8Q99549 860 aa26.86■■□□□ 1.89
VCPKMT-204ENST00000491402 LNPKQ9C0E8 428 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms