RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CTSWP56202 376 aa13.65□□□□□ -0.22
VARS2-210ENST00000490699 DDR1Q08345 913 aa13.65□□□□□ -0.22
VARS2-210ENST00000490699 TAF7LQ5H9L4 462 aa13.65□□□□□ -0.22
VARS2-210ENST00000490699 PRR5LQ6MZQ0 368 aa13.65□□□□□ -0.22
VARS2-210ENST00000490699 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
VARS2-210ENST00000490699 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
VARS2-210ENST00000490699 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
VARS2-210ENST00000490699 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
VARS2-210ENST00000490699 HCLS1P14317 486 aaPredicted RBP13.64□□□□□ -0.23
VARS2-210ENST00000490699 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
VARS2-210ENST00000490699 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
VARS2-210ENST00000490699 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
VARS2-210ENST00000490699 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
VARS2-210ENST00000490699 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
VARS2-210ENST00000490699 BICC1Q9H694 974 aaKnown RBP13.64□□□□□ -0.23
VARS2-210ENST00000490699 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
VARS2-210ENST00000490699 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
VARS2-210ENST00000490699 SLC10A5Q5PT55 438 aa13.63□□□□□ -0.23
VARS2-210ENST00000490699 CCDC136Q96JN2 1154 aa13.63□□□□□ -0.23
VARS2-210ENST00000490699 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
VARS2-210ENST00000490699 RWDD1Q9H446 243 aaPredicted RBP13.63□□□□□ -0.23
VARS2-210ENST00000490699 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
VARS2-210ENST00000490699 NRXN2Q9P2S2 1712 aa13.62□□□□□ -0.23
VARS2-210ENST00000490699 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
VARS2-210ENST00000490699 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
VARS2-210ENST00000490699 CASP7P55210 303 aa13.62□□□□□ -0.23
VARS2-210ENST00000490699 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
VARS2-210ENST00000490699 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
VARS2-210ENST00000490699 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
VARS2-210ENST00000490699 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
VARS2-210ENST00000490699 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
VARS2-210ENST00000490699 DDX60Q8IY21 1712 aaKnown RBP13.61□□□□□ -0.23
VARS2-210ENST00000490699 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
VARS2-210ENST00000490699 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
VARS2-210ENST00000490699 CEP85Q6P2H3 762 aa13.61□□□□□ -0.23
VARS2-210ENST00000490699 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
VARS2-210ENST00000490699 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
VARS2-210ENST00000490699 RBM17Q96I25 401 aaKnown RBP13.61□□□□□ -0.23
VARS2-210ENST00000490699 PPP4R2Q9NY27 417 aa13.61□□□□□ -0.23
VARS2-210ENST00000490699 H0YIN7 160 aa13.6□□□□□ -0.23
VARS2-210ENST00000490699 IGHMBP2P38935 993 aaKnown RBP13.6□□□□□ -0.23
VARS2-210ENST00000490699 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
VARS2-210ENST00000490699 OS9Q13438 667 aaPredicted RBP13.6□□□□□ -0.23
VARS2-210ENST00000490699 MTX1Q13505 466 aa13.6□□□□□ -0.23
VARS2-210ENST00000490699 RABL6Q3YEC7 729 aaPredicted RBP13.6□□□□□ -0.23
VARS2-210ENST00000490699 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
VARS2-210ENST00000490699 CCDC24Q8N4L8 307 aa13.6□□□□□ -0.23
VARS2-210ENST00000490699 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
VARS2-210ENST00000490699 FOXO4P98177 505 aa13.59□□□□□ -0.23
VARS2-210ENST00000490699 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
VARS2-210ENST00000490699 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
VARS2-210ENST00000490699 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
VARS2-210ENST00000490699 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
VARS2-210ENST00000490699 C10orf71Q711Q0 1435 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 CSF1RP07333 972 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 NPR1P16066 1061 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 ITGA6P23229 1130 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 ALDH1B1P30837 517 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 C2CD5Q86YS7 1000 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.24
VARS2-210ENST00000490699 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■■■□□ 15.2
VARS2-210ENST00000490699 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
VARS2-210ENST00000490699 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 ERC1Q8IUD2 1116 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 SSH3Q8TE77 659 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 GREM2Q9H772 168 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 CD2APQ9Y5K6 639 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 GTF3C3Q9Y5Q9 886 aa13.57□□□□□ -0.24
VARS2-210ENST00000490699 TNRC6CQ9HCJ0 1690 aaKnown RBP13.56□□□□□ -0.24
VARS2-210ENST00000490699 SURF6O75683 361 aaKnown RBP13.56□□□□□ -0.24
VARS2-210ENST00000490699 TGFB2P61812 414 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 CRY2Q49AN0 593 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
VARS2-210ENST00000490699 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 KAZALD1Q96I82 304 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
VARS2-210ENST00000490699 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 PTGER2P43116 358 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 GRAPQ13588 217 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 STYK1Q6J9G0 422 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 GRAPLQ8TC17 118 aaPredicted RBP13.55□□□□□ -0.24
VARS2-210ENST00000490699 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
VARS2-210ENST00000490699 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
VARS2-210ENST00000490699 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
VARS2-210ENST00000490699 BBOX1O75936 387 aa13.54□□□□□ -0.24
VARS2-210ENST00000490699 SRGNP10124 158 aa13.54□□□□□ -0.24
VARS2-210ENST00000490699 RPS8P62241 208 aaKnown RBP13.54□□□□□ -0.24
VARS2-210ENST00000490699 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
VARS2-210ENST00000490699 COPRSQ9NQ92 184 aa13.54□□□□□ -0.24
VARS2-210ENST00000490699 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
VARS2-210ENST00000490699 CIAO1O76071 339 aa13.53□□□□□ -0.24
VARS2-210ENST00000490699 HOXA10P31260 410 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms