RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 CRISPLD1Q9H336 500 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
CSTF1-205ENST00000490539 POGZQ7Z3K3 1410 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 TIAM1Q13009 1591 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 SUPT6HQ7KZ85 1726 aaKnown RBP7.06□□□□□ -1.28
CSTF1-205ENST00000490539 LRRC9Q6ZRR7 1453 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 LRRIQ1Q96JM4 1722 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 TSPY4P0CV99 314 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 TSPY10P0CW01 314 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 PIP4K2BP78356 416 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 TBCELQ5QJ74 424 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 NLRP8Q86W28 1048 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 Q8N3U1 123 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 SCG3Q8WXD2 468 aaKnown RBP7.05□□□□□ -1.28
CSTF1-205ENST00000490539 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 CFHR5Q9BXR6 569 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.05□□□□□ -1.28
CSTF1-205ENST00000490539 GPC6Q9Y625 555 aaPredicted RBP7.05□□□□□ -1.28
CSTF1-205ENST00000490539 PARP3Q9Y6F1 533 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 ATAD2Q6PL18 1390 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 PREX2Q70Z35 1606 aa7.05□□□□□ -1.28
CSTF1-205ENST00000490539 SPAG9O60271 1321 aaKnown RBP7.04□□□□□ -1.28
CSTF1-205ENST00000490539 ACIN1Q9UKV3 1341 aaKnown RBP7.04□□□□□ -1.28
CSTF1-205ENST00000490539 ITSN2Q9NZM3 1697 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-205ENST00000490539 DKK1O94907 266 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 TRIM26Q12899 539 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-205ENST00000490539 ELOAQ14241 798 aaKnown RBP7.04□□□□□ -1.28
CSTF1-205ENST00000490539 HIF1AQ16665 826 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 STAG2Q8N3U4 1231 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 CCDC82Q8N4S0 544 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 AFAP1Q8N556 730 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 LRRC4BQ9NT99 713 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 USP3Q9Y6I4 520 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 GPATCH8Q9UKJ3 1502 aaKnown RBP7.04□□□□□ -1.28
CSTF1-205ENST00000490539 NCOA2Q15596 1464 aa7.04□□□□□ -1.28
CSTF1-205ENST00000490539 KIAA1107Q9UPP5 1409 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 A0A1W2PNR3 127 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 GPR25O00155 361 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 BAG6P46379 1132 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 HNRNPMP52272 730 aaKnown RBP eCLIP7.03□□□□□ -1.28
CSTF1-205ENST00000490539 C1orf53Q5VUE5 145 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 ANKIB1Q9P2G1 1089 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 ATXN7L1Q9ULK2 861 aaPredicted RBP7.03□□□□□ -1.28
CSTF1-205ENST00000490539 PCDHGC4Q9Y5F7 938 aa7.03□□□□□ -1.28
CSTF1-205ENST00000490539 ZFYVE16Q7Z3T8 1539 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 PPP1R15AO75807 674 aaPredicted RBP7.02□□□□□ -1.29
CSTF1-205ENST00000490539 ATG7O95352 703 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 MX2P20592 715 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 ATP4AP20648 1035 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 IGFBP4P22692 258 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 HIRAP54198 1017 aaPredicted RBP7.02□□□□□ -1.29
CSTF1-205ENST00000490539 SWI5Q1ZZU3 235 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 RHPN1Q8TCX5 695 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 ACDQ96AP0 544 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 ARXQ96QS3 562 aa7.02□□□□□ -1.29
CSTF1-205ENST00000490539 ZNF335Q9H4Z2 1342 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-205ENST00000490539 CDC42BPAQ5VT25 1732 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 CDC42BPBQ9Y5S2 1711 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 ATP10AO60312 1499 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 EML1O00423 815 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 ATXN7O15265 892 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-205ENST00000490539 ZNF295-AS1Q8N0V1 137 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 ZDHHC1Q8WTX9 485 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 HCN4Q9Y3Q4 1203 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 RICTORQ6R327 1708 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 ABCC1P33527 1531 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 ZMYM4Q5VZL5 1548 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 MYOM3Q5VTT5 1437 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
CSTF1-205ENST00000490539 TOM1O60784 492 aa7□□□□□ -1.29
CSTF1-205ENST00000490539 TXLNAP40222 546 aa7□□□□□ -1.29
CSTF1-205ENST00000490539 MAP2K3P46734 347 aa7□□□□□ -1.29
CSTF1-205ENST00000490539 ZIC5Q96T25 663 aa7□□□□□ -1.29
CSTF1-205ENST00000490539 ZCCHC2Q9C0B9 1178 aaKnown RBP7□□□□□ -1.29
CSTF1-205ENST00000490539 PHACTR1Q9C0D0 580 aa7□□□□□ -1.29
CSTF1-205ENST00000490539 C9orf84Q5VXU9 1444 aa7□□□□□ -1.29
CSTF1-205ENST00000490539 SETBP1Q9Y6X0 1596 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 MLH3Q9UHC1 1453 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 FOXO3O43524 673 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 FURINP09958 794 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 MLECQ14165 292 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 FAM50AQ14320 339 aaKnown RBP6.99□□□□□ -1.29
CSTF1-205ENST00000490539 ALYREFQ86V81 257 aaKnown RBP6.99□□□□□ -1.29
CSTF1-205ENST00000490539 NGLY1Q96IV0 654 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 C2orf49Q9BVC5 232 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-205ENST00000490539 ARHGEF40Q8TER5 1519 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 SYCP2Q9BX26 1530 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 TRAPPC8Q9Y2L5 1435 aa6.99□□□□□ -1.29
CSTF1-205ENST00000490539 ZNF644Q9H582 1327 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-205ENST00000490539 KHNYNO15037 678 aaKnown RBP6.98□□□□□ -1.29
CSTF1-205ENST00000490539 OIP5O43482 229 aa6.98□□□□□ -1.29
CSTF1-205ENST00000490539 C21orf2O43822 256 aa6.98□□□□□ -1.29
CSTF1-205ENST00000490539 BMP4P12644 408 aa6.98□□□□□ -1.29
CSTF1-205ENST00000490539 FGFR3P22607 806 aa6.98□□□□□ -1.29
CSTF1-205ENST00000490539 ZEB1P37275 1124 aaPredicted RBP6.98□□□□□ -1.29
CSTF1-205ENST00000490539 SRPK2P78362 688 aaKnown RBP6.98□□□□□ -1.29
CSTF1-205ENST00000490539 SAMD5Q5TGI4 173 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms