RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 NBPF11Q86T75 865 aa7.41□□□□□ -1.22
RBM39-235ENST00000490354 FAM35AQ86V20 835 aa7.41□□□□□ -1.22
RBM39-235ENST00000490354 MAFBQ9Y5Q3 323 aaPredicted RBP7.41□□□□□ -1.22
RBM39-235ENST00000490354 PRKCSHP14314 528 aaPredicted RBP7.4□□□□□ -1.22
RBM39-235ENST00000490354 LRP8Q14114 963 aa7.4□□□□□ -1.22
RBM39-235ENST00000490354 GRIK5Q16478 980 aa7.4□□□□□ -1.22
RBM39-235ENST00000490354 GLMNQ92990 594 aa7.4□□□□□ -1.22
RBM39-235ENST00000490354 LPIN3Q9BQK8 851 aa7.4□□□□□ -1.22
RBM39-235ENST00000490354 FANCD2Q9BXW9 1451 aa7.4□□□□□ -1.22
RBM39-235ENST00000490354 NESP48681 1621 aa7.4□□□□□ -1.22
RBM39-235ENST00000490354 ZBTB42B2RXF5 422 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 IDH3AP50213 366 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 PLAURQ03405 335 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 DPYDQ12882 1025 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 CRTC2Q53ET0 693 aaPredicted RBP7.39□□□□□ -1.23
RBM39-235ENST00000490354 LARP1Q6PKG0 1096 aaKnown RBP7.39□□□□□ -1.23
RBM39-235ENST00000490354 KRT25Q7Z3Z0 450 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 KLK14Q9P0G3 267 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
RBM39-235ENST00000490354 LAMC3Q9Y6N6 1575 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 EPB42P16452 691 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 IGFBP4P22692 258 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 INPP5BP32019 993 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 PTK7Q13308 1070 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 PERM1Q5SV97 790 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 CLUAP1Q96AJ1 413 aa7.38□□□□□ -1.23
RBM39-235ENST00000490354 HYAL3O43820 417 aaPredicted RBP7.37□□□□□ -1.23
RBM39-235ENST00000490354 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
RBM39-235ENST00000490354 TARSP26639 723 aaKnown RBP7.37□□□□□ -1.23
RBM39-235ENST00000490354 MLLT1Q03111 559 aaPredicted RBP7.37□□□□□ -1.23
RBM39-235ENST00000490354 PCSK7Q16549 785 aa7.37□□□□□ -1.23
RBM39-235ENST00000490354 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
RBM39-235ENST00000490354 FBXO11Q86XK2 927 aa7.37□□□□□ -1.23
RBM39-235ENST00000490354 WFDC12Q8WWY7 111 aa7.37□□□□□ -1.23
RBM39-235ENST00000490354 IFT43Q96FT9 208 aa7.37□□□□□ -1.23
RBM39-235ENST00000490354 FRRS1LQ9P0K9 344 aa7.37□□□□□ -1.23
RBM39-235ENST00000490354 NOS3P29474 1203 aa7.36□□□□□ -1.23
RBM39-235ENST00000490354 IREB2P48200 963 aaKnown RBP7.36□□□□□ -1.23
RBM39-235ENST00000490354 DGKZQ13574 1117 aa7.36□□□□□ -1.23
RBM39-235ENST00000490354 FNBP4Q8N3X1 1017 aaPredicted RBP7.36□□□□□ -1.23
RBM39-235ENST00000490354 DTWD1Q8N5C7 304 aa7.36□□□□□ -1.23
RBM39-235ENST00000490354 TRPM4Q8TD43 1214 aa7.36□□□□□ -1.23
RBM39-235ENST00000490354 ABCC8Q09428 1581 aa7.36□□□□□ -1.23
RBM39-235ENST00000490354 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L21D6R901 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 SASH3O75995 380 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 RARAP10276 462 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 ARSDP51689 593 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 KANK4Q5T7N3 995 aaPredicted RBP7.35□□□□□ -1.23
RBM39-235ENST00000490354 ELMSAN1Q6PJG2 1045 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 WFDC8Q8IUA0 241 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 ANKMY2Q8IV38 441 aa7.35□□□□□ -1.23
RBM39-235ENST00000490354 GPLD1P80108 840 aa7.34□□□□□ -1.23
RBM39-235ENST00000490354 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
RBM39-235ENST00000490354 PROSER2Q86WR7 435 aaPredicted RBP7.34□□□□□ -1.23
RBM39-235ENST00000490354 PPP1R12CQ9BZL4 782 aa7.34□□□□□ -1.23
RBM39-235ENST00000490354 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
RBM39-235ENST00000490354 CEP164Q9UPV0 1460 aa7.34□□□□□ -1.23
RBM39-235ENST00000490354 FAM196BA6NMK8 535 aa7.33□□□□□ -1.24
RBM39-235ENST00000490354 MICAL2O94851 1124 aa7.33□□□□□ -1.24
RBM39-235ENST00000490354 IGF2-ASQ6U949 168 aa7.33□□□□□ -1.24
RBM39-235ENST00000490354 TTC9Q92623 222 aa7.33□□□□□ -1.24
RBM39-235ENST00000490354 MEGF10Q96KG7 1140 aa7.33□□□□□ -1.24
RBM39-235ENST00000490354 SMG9Q9H0W8 520 aaKnown RBP7.33□□□□□ -1.24
RBM39-235ENST00000490354 USP20Q9Y2K6 914 aa7.33□□□□□ -1.24
RBM39-235ENST00000490354 CUX1P39880 1505 aa7.32□□□□□ -1.24
RBM39-235ENST00000490354 DEAF1O75398 565 aaPredicted RBP7.32□□□□□ -1.24
RBM39-235ENST00000490354 C11orf91Q3C1V1 193 aa7.32□□□□□ -1.24
RBM39-235ENST00000490354 KRTAP1-3Q8IUG1 177 aa7.32□□□□□ -1.24
RBM39-235ENST00000490354 C11orf16Q9NQ32 467 aa7.32□□□□□ -1.24
RBM39-235ENST00000490354 SYNJ1O43426 1573 aa7.31□□□□□ -1.24
RBM39-235ENST00000490354 FOXO3O43524 673 aa7.31□□□□□ -1.24
RBM39-235ENST00000490354 EIF2AK2P19525 551 aaKnown RBP7.31□□□□□ -1.24
RBM39-235ENST00000490354 FAM9AQ8IZU1 332 aaPredicted RBP7.31□□□□□ -1.24
RBM39-235ENST00000490354 CALR3Q96L12 384 aaKnown RBP7.31□□□□□ -1.24
RBM39-235ENST00000490354 ARXQ96QS3 562 aa7.31□□□□□ -1.24
RBM39-235ENST00000490354 VRTNQ9H8Y1 702 aa7.31□□□□□ -1.24
RBM39-235ENST00000490354 SOGA1O94964 1423 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 EEA1Q15075 1411 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 OPLAHO14841 1288 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
RBM39-235ENST00000490354 WEE1P30291 646 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 NRLP54845 237 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 MYO19Q96H55 970 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 KRTAP4-12Q9BQ66 201 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 RNF112Q9ULX5 631 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 RTCBQ9Y3I0 505 aaKnown RBP7.3□□□□□ -1.24
RBM39-235ENST00000490354 TOP2BQ02880 1626 aa7.3□□□□□ -1.24
RBM39-235ENST00000490354 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms