RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 RSBN1LQ6PCB5 846 aaPredicted RBP5.89□□□□□ -1.47
RTN1-207ENST00000490111 METTL3Q86U44 580 aaKnown RBP5.89□□□□□ -1.47
RTN1-207ENST00000490111 LDHDQ86WU2 507 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 ANKRD24Q8TF21 1146 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 SPIRE2Q8WWL2 714 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 KCNB2Q92953 911 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 SPACA7Q96KW9 195 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 TINF2Q9BSI4 451 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 NOVA2Q9UNW9 492 aaKnown RBP5.89□□□□□ -1.47
RTN1-207ENST00000490111 PARP3Q9Y6F1 533 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 NFAT5O94916 1531 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 THSD7BQ9C0I4 1608 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 CHRNA5P30532 468 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 FXR1P51114 621 aaKnown RBP eCLIP5.88□□□□□ -1.47
RTN1-207ENST00000490111 IGBP1P78318 339 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 NBPF1Q3BBV0 1214 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 CCDC144BQ3MJ40 725 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 RTL5Q5HYW3 569 aaPredicted RBP5.88□□□□□ -1.47
RTN1-207ENST00000490111 PLPP6Q8IY26 295 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 SLC17A8Q8NDX2 589 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 ZCRB1Q8TBF4 217 aaKnown RBP5.88□□□□□ -1.47
RTN1-207ENST00000490111 VTI1AQ96AJ9 217 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 GPR101Q96P66 508 aaPredicted RBP5.88□□□□□ -1.47
RTN1-207ENST00000490111 TRIM34Q9BYJ4 488 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 CABP1Q9NZU7 370 aa5.88□□□□□ -1.47
RTN1-207ENST00000490111 BIN2Q9UBW5 565 aaPredicted RBP5.88□□□□□ -1.47
RTN1-207ENST00000490111 ABT1Q9ULW3 272 aaKnown RBP5.88□□□□□ -1.47
RTN1-207ENST00000490111 hCG_2014768A0A024R1R8 64 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 SCAMP3O14828 347 aaKnown RBP5.87□□□□□ -1.47
RTN1-207ENST00000490111 CA12O43570 354 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 PARNO95453 639 aaKnown RBP5.87□□□□□ -1.47
RTN1-207ENST00000490111 ECE1P42892 770 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 MRPL58Q14197 206 aaKnown RBP5.87□□□□□ -1.47
RTN1-207ENST00000490111 HSP90AB4PQ58FF6 505 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 TRAPPC3LQ5T215 181 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 MPRIPQ6WCQ1 1025 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 MORC4Q8TE76 937 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 DHX38Q92620 1227 aaKnown RBP5.87□□□□□ -1.47
RTN1-207ENST00000490111 SMARCC1Q92922 1105 aaPredicted RBP5.87□□□□□ -1.47
RTN1-207ENST00000490111 CAPNS2Q96L46 248 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 BACH2Q9BYV9 841 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 MAGEC2Q9UBF1 373 aaPredicted RBP5.87□□□□□ -1.47
RTN1-207ENST00000490111 PITPNM2Q9BZ72 1349 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 LTBP1Q14766 1721 aa5.87□□□□□ -1.47
RTN1-207ENST00000490111 TTC21BQ7Z4L5 1316 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 IQCA1LA6NCM1 817 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 MAFGO15525 162 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 DDNO94850 711 aaPredicted RBP5.86□□□□□ -1.47
RTN1-207ENST00000490111 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
RTN1-207ENST00000490111 MAP2K2P36507 400 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 GRM1Q13255 1194 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 CSPP1Q1MSJ5 1256 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 LINC00116Q8NCU8 138 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 ARMC5Q96C12 935 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 BRINP2Q9C0B6 783 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 PIF1Q9H611 641 aa5.86□□□□□ -1.47
RTN1-207ENST00000490111 HMX1Q9NP08 348 aaPredicted RBP5.86□□□□□ -1.47
RTN1-207ENST00000490111 CCDC88AQ3V6T2 1871 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 GYS1P13807 737 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 GJA5P36382 358 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 SETQ01105 290 aaPredicted RBP5.85□□□□□ -1.47
RTN1-207ENST00000490111 ERFEQ4G0M1 354 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 CYP4F22Q6NT55 531 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 SLC43A3Q8NBI5 491 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 TMC2Q8TDI7 906 aa5.85□□□□□ -1.47
RTN1-207ENST00000490111 CLP1Q92989 425 aaKnown RBP5.85□□□□□ -1.47
RTN1-207ENST00000490111 TAF1DQ9H5J8 278 aaPredicted RBP5.85□□□□□ -1.47
RTN1-207ENST00000490111 CASP8AP2Q9UKL3 1982 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 TTC21AQ8NDW8 1320 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 CCDC194A0A1B0GVG4 234 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 NFKBIEO00221 500 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 MAP3K13O43283 966 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 AOC2O75106 756 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 PEX14O75381 377 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 OATP04181 439 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 SIK1P57059 783 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 COL19A1Q14993 1142 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 EAPPQ56P03 285 aaPredicted RBP5.84□□□□□ -1.47
RTN1-207ENST00000490111 SPTY2D1Q68D10 685 aaPredicted RBP5.84□□□□□ -1.47
RTN1-207ENST00000490111 METTL16Q86W50 562 aaKnown RBP5.84□□□□□ -1.47
RTN1-207ENST00000490111 CNTROBQ8N137 903 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 PXYLP1Q8TE99 480 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 ASB16Q96NS5 453 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 BCL11AQ9H165 835 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 PRKAG2Q9UGJ0 569 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 RTCBQ9Y3I0 505 aaKnown RBP5.84□□□□□ -1.47
RTN1-207ENST00000490111 ADAMTS7Q9UKP4 1686 aa5.84□□□□□ -1.47
RTN1-207ENST00000490111 LTN1O94822 1766 aa5.83□□□□□ -1.48
RTN1-207ENST00000490111 LZTS3O60299 673 aaPredicted RBP5.83□□□□□ -1.48
RTN1-207ENST00000490111 RFC4P35249 363 aa5.83□□□□□ -1.48
RTN1-207ENST00000490111 ITPK1Q13572 414 aa5.83□□□□□ -1.48
RTN1-207ENST00000490111 TCEAL1Q15170 157 aa5.83□□□□□ -1.48
RTN1-207ENST00000490111 MAP1SQ66K74 1059 aaPredicted RBP5.83□□□□□ -1.48
RTN1-207ENST00000490111 SMC5Q8IY18 1101 aa5.83□□□□□ -1.48
RTN1-207ENST00000490111 LTV1Q96GA3 475 aaPredicted RBP5.83□□□□□ -1.48
RTN1-207ENST00000490111 FAN1Q9Y2M0 1017 aa5.83□□□□□ -1.48
RTN1-207ENST00000490111 NOP58Q9Y2X3 529 aaKnown RBP5.83□□□□□ -1.48
RTN1-207ENST00000490111 SCN4AP35499 1836 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms