RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 RTKN2Q8IZC4 609 aa22.92■■□□□ 1.26
SRM-206ENST00000490101 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
SRM-206ENST00000490101 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
SRM-206ENST00000490101 POTEIP0CG38 1075 aa22.91■■□□□ 1.26
SRM-206ENST00000490101 POTEJP0CG39 1038 aa22.91■■□□□ 1.26
SRM-206ENST00000490101 XAGE3Q8WTP9 111 aa22.91■■□□□ 1.26
SRM-206ENST00000490101 RPGRQ92834 1020 aaKnown RBP22.91■■□□□ 1.26
SRM-206ENST00000490101 DDX19BQ9UMR2 479 aa22.91■■□□□ 1.26
SRM-206ENST00000490101 F6X3S4 739 aa22.9■■□□□ 1.26
SRM-206ENST00000490101 CRY2Q49AN0 593 aa22.9■■□□□ 1.26
SRM-206ENST00000490101 KSR2Q6VAB6 950 aa22.9■■□□□ 1.26
SRM-206ENST00000490101 GIGYF2Q6Y7W6 1299 aaKnown RBP22.9■■□□□ 1.26
SRM-206ENST00000490101 COPS6Q7L5N1 327 aa22.9■■□□□ 1.26
SRM-206ENST00000490101 ITPRIPQ8IWB1 547 aa22.9■■□□□ 1.26
SRM-206ENST00000490101 ZNF541Q9H0D2 1346 aa22.89■■□□□ 1.26
SRM-206ENST00000490101 PI4KAP2A4QPH2 592 aa22.89■■□□□ 1.25
SRM-206ENST00000490101 CCT4P50991 539 aaKnown RBP22.89■■□□□ 1.25
SRM-206ENST00000490101 CHADLQ6NUI6 762 aa22.89■■□□□ 1.25
SRM-206ENST00000490101 ZNF34Q8IZ26 560 aa22.89■■□□□ 1.25
SRM-206ENST00000490101 SYNE4Q8N205 404 aa22.89■■□□□ 1.25
SRM-206ENST00000490101 PI4KAP1Q8N8J0 262 aa22.89■■□□□ 1.25
SRM-206ENST00000490101 JMYQ8N9B5 988 aa22.89■■□□□ 1.25
SRM-206ENST00000490101 IBTKQ9P2D0 1353 aaPredicted RBP22.89■■□□□ 1.25
SRM-206ENST00000490101 NTSR2O95665 410 aa22.88■■□□□ 1.25
SRM-206ENST00000490101 IARSP41252 1262 aaKnown RBP22.88■■□□□ 1.25
SRM-206ENST00000490101 DNAAF4Q8WXU2 420 aa22.88■■□□□ 1.25
SRM-206ENST00000490101 IQCA1LA6NCM1 817 aa22.87■■□□□ 1.25
SRM-206ENST00000490101 AIMP1Q12904 312 aaKnown RBP22.87■■□□□ 1.25
SRM-206ENST00000490101 CHMP4BQ9H444 224 aaKnown RBP22.87■■□□□ 1.25
SRM-206ENST00000490101 RIC1Q4ADV7 1423 aa22.86■■□□□ 1.25
SRM-206ENST00000490101 SLC4A10Q6U841 1118 aa22.86■■□□□ 1.25
SRM-206ENST00000490101 PPP1R42Q7Z4L9 355 aa22.86■■□□□ 1.25
SRM-206ENST00000490101 L3MBTL3Q96JM7 780 aaPredicted RBP22.86■■□□□ 1.25
SRM-206ENST00000490101 ZBTB7BO15156 539 aaPredicted RBP22.85■■□□□ 1.25
SRM-206ENST00000490101 PARP10Q53GL7 1025 aa22.85■■□□□ 1.25
SRM-206ENST00000490101 ANKRD13DQ6ZTN6 518 aa22.85■■□□□ 1.25
SRM-206ENST00000490101 C3orf67Q6ZVT6 689 aa22.85■■□□□ 1.25
SRM-206ENST00000490101 SLC51AQ86UW1 340 aa22.85■■□□□ 1.25
SRM-206ENST00000490101 RBM17Q96I25 401 aaKnown RBP22.85■■□□□ 1.25
SRM-206ENST00000490101 TAF1DQ9H5J8 278 aaPredicted RBP22.85■■□□□ 1.25
SRM-206ENST00000490101 MAP3K2Q9Y2U5 619 aa22.85■■□□□ 1.25
SRM-206ENST00000490101 HOXA10P31260 410 aaPredicted RBP22.84■■□□□ 1.25
SRM-206ENST00000490101 EAPPQ56P03 285 aaPredicted RBP22.84■■□□□ 1.25
SRM-206ENST00000490101 PLBD2Q8NHP8 589 aa22.84■■□□□ 1.25
SRM-206ENST00000490101 PSMD1Q99460 953 aa22.84■■□□□ 1.25
SRM-206ENST00000490101 SCN4AP35499 1836 aa22.84■■□□□ 1.25
SRM-206ENST00000490101 SNED1Q8TER0 1413 aa22.83■■□□□ 1.25
SRM-206ENST00000490101 PPEF1O14829 653 aaPredicted RBP22.83■■□□□ 1.25
SRM-206ENST00000490101 BEND3Q5T5X7 828 aa22.83■■□□□ 1.25
SRM-206ENST00000490101 RIC3Q7Z5B4 369 aa22.83■■□□□ 1.25
SRM-206ENST00000490101 JDP2Q8WYK2 163 aa22.83■■□□□ 1.25
SRM-206ENST00000490101 UTP14AQ9BVJ6 771 aaKnown RBP22.83■■□□□ 1.25
SRM-206ENST00000490101 ZBTB40Q9NUA8 1239 aa22.83■■□□□ 1.25
SRM-206ENST00000490101 CC2D2BQ6DHV5 1058 aa22.82■■□□□ 1.24
SRM-206ENST00000490101 LDHDQ86WU2 507 aa22.82■■□□□ 1.24
SRM-206ENST00000490101 SRCIN1Q9C0H9 1055 aa22.82■■□□□ 1.24
SRM-206ENST00000490101 FZD9O00144 591 aa22.81■■□□□ 1.24
SRM-206ENST00000490101 NLRP3Q96P20 1036 aa22.81■■□□□ 1.24
SRM-206ENST00000490101 CRAMP1Q96RY5 1269 aa22.81■■□□□ 1.24
SRM-206ENST00000490101 METTL22Q9BUU2 404 aaPredicted RBP22.81■■□□□ 1.24
SRM-206ENST00000490101 HACL1Q9UJ83 578 aa22.81■■□□□ 1.24
SRM-206ENST00000490101 CLEC11AQ9Y240 323 aa22.81■■□□□ 1.24
SRM-206ENST00000490101 ALDH1L1O75891 902 aa22.8■■□□□ 1.24
SRM-206ENST00000490101 LINS1Q8NG48 757 aa22.8■■□□□ 1.24
SRM-206ENST00000490101 GJA3Q9Y6H8 435 aa22.8■■□□□ 1.24
SRM-206ENST00000490101 ANKRD36CQ5JPF3 1778 aa22.8■■□□□ 1.24
SRM-206ENST00000490101 COL4A5P29400 1685 aa22.8■■□□□ 1.24
SRM-206ENST00000490101 EPHX2P34913 555 aa22.79■■□□□ 1.24
SRM-206ENST00000490101 LARGE2Q8N3Y3 721 aa22.79■■□□□ 1.24
SRM-206ENST00000490101 EIF6P56537 245 aaKnown RBP22.78■■□□□ 1.24
SRM-206ENST00000490101 NEXNQ0ZGT2 675 aa22.78■■□□□ 1.24
SRM-206ENST00000490101 HSP90AB3PQ58FF7 597 aa22.78■■□□□ 1.24
SRM-206ENST00000490101 GPC2Q8N158 579 aa22.78■■□□□ 1.24
SRM-206ENST00000490101 CREBZFQ9NS37 354 aa22.78■■□□□ 1.24
SRM-206ENST00000490101 MKRN1Q9UHC7 482 aaKnown RBP22.78■■□□□ 1.24
SRM-206ENST00000490101 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
SRM-206ENST00000490101 COL13A1Q5TAT6 717 aaPredicted RBP22.77■■□□□ 1.24
SRM-206ENST00000490101 NLRP10Q86W26 655 aa22.77■■□□□ 1.24
SRM-206ENST00000490101 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
SRM-206ENST00000490101 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
SRM-206ENST00000490101 HSPA1AP0DMV8 641 aaKnown RBP22.76■■□□□ 1.23
SRM-206ENST00000490101 HSPA1BP0DMV9 641 aaKnown RBP22.76■■□□□ 1.23
SRM-206ENST00000490101 GRIPAP1Q4V328 841 aa22.76■■□□□ 1.23
SRM-206ENST00000490101 SLC10A5Q5PT55 438 aa22.76■■□□□ 1.23
SRM-206ENST00000490101 TRMT112Q9UI30 125 aaKnown RBP22.76■■□□□ 1.23
SRM-206ENST00000490101 IGKV5-2P06315 115 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 GNAI3P08754 354 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 TCIRG1Q13488 830 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 B4GALNT3Q6L9W6 998 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 MEIS3Q99687 375 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 MYD88Q99836 296 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 USP44Q9H0E7 712 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 PCDHB15Q9Y5E8 787 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 PASKQ96RG2 1323 aa22.75■■□□□ 1.23
SRM-206ENST00000490101 LAMB2P55268 1798 aa22.74■■□□□ 1.23
SRM-206ENST00000490101 PPIP5K2O43314 1243 aa22.74■■□□□ 1.23
SRM-206ENST00000490101 NEURL1BA8MQ27 555 aa22.73■■□□□ 1.23
SRM-206ENST00000490101 PNMA8AQ86V59 439 aaPredicted RBP22.73■■□□□ 1.23
SRM-206ENST00000490101 NIM1KQ8IY84 436 aa22.73■■□□□ 1.23
SRM-206ENST00000490101 ATP6V0A2Q9Y487 856 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms