RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
AC055748.1-201ENST00000489836 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 SMPD1P17405 629 aa13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 TNS2Q63HR2 1409 aa13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 ANKRD26Q9UPS8 1709 aa13.61□□□□□ -0.23
AC055748.1-201ENST00000489836 TRIM37O94972 964 aa13.6□□□□□ -0.23
AC055748.1-201ENST00000489836 ZNF511Q8NB15 262 aa13.6□□□□□ -0.23
AC055748.1-201ENST00000489836 NCAPD2Q15021 1401 aa13.59□□□□□ -0.23
AC055748.1-201ENST00000489836 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
AC055748.1-201ENST00000489836 BAG6P46379 1132 aa13.59□□□□□ -0.23
AC055748.1-201ENST00000489836 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
AC055748.1-201ENST00000489836 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.23
AC055748.1-201ENST00000489836 MORC1Q86VD1 984 aa13.58□□□□□ -0.24
AC055748.1-201ENST00000489836 AAASQ9NRG9 546 aa13.58□□□□□ -0.24
AC055748.1-201ENST00000489836 RGPD1P0DJD0 1748 aa13.58□□□□□ -0.24
AC055748.1-201ENST00000489836 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
AC055748.1-201ENST00000489836 SIAH2O43255 324 aa13.57□□□□□ -0.24
AC055748.1-201ENST00000489836 TNNT2P45379 298 aaPredicted RBP13.57□□□□□ -0.24
AC055748.1-201ENST00000489836 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
AC055748.1-201ENST00000489836 MAP2P11137 1827 aaKnown RBP13.56□□□□□ -0.24
AC055748.1-201ENST00000489836 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
AC055748.1-201ENST00000489836 ALDH1A1P00352 501 aa13.56□□□□□ -0.24
AC055748.1-201ENST00000489836 AVPP01185 164 aa13.56□□□□□ -0.24
AC055748.1-201ENST00000489836 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 MEGF6O75095 1541 aa13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 APBA3O96018 575 aa13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
AC055748.1-201ENST00000489836 PLSCR1O15162 318 aa13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 LRRN4Q8WUT4 740 aa13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 HPS1Q92902 700 aa13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
AC055748.1-201ENST00000489836 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
AC055748.1-201ENST00000489836 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
AC055748.1-201ENST00000489836 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
AC055748.1-201ENST00000489836 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
AC055748.1-201ENST00000489836 POTECB2RU33 542 aa13.52□□□□□ -0.25
AC055748.1-201ENST00000489836 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
AC055748.1-201ENST00000489836 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
AC055748.1-201ENST00000489836 IGSF1Q8N6C5 1336 aa13.52□□□□□ -0.25
AC055748.1-201ENST00000489836 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
AC055748.1-201ENST00000489836 KCNQ2O43526 872 aa13.51□□□□□ -0.25
AC055748.1-201ENST00000489836 ZNF787Q6DD87 383 aa13.51□□□□□ -0.25
AC055748.1-201ENST00000489836 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
AC055748.1-201ENST00000489836 AP1G2O75843 785 aa13.5□□□□□ -0.25
AC055748.1-201ENST00000489836 MTHFSP49914 203 aa13.5□□□□□ -0.25
AC055748.1-201ENST00000489836 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
AC055748.1-201ENST00000489836 AXIN1O15169 862 aa13.49□□□□□ -0.25
AC055748.1-201ENST00000489836 IL13P35225 146 aa13.49□□□□□ -0.25
AC055748.1-201ENST00000489836 C4orf48Q5BLP8 95 aa13.49□□□□□ -0.25
AC055748.1-201ENST00000489836 CRIPAKQ8N1N5 446 aa13.49□□□□□ -0.25
AC055748.1-201ENST00000489836 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
AC055748.1-201ENST00000489836 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
AC055748.1-201ENST00000489836 CYP27B1O15528 508 aa13.48□□□□□ -0.25
AC055748.1-201ENST00000489836 VARSP26640 1264 aaKnown RBP13.48□□□□□ -0.25
AC055748.1-201ENST00000489836 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
AC055748.1-201ENST00000489836 RREB1Q92766 1687 aa13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 PCDH11XQ9BZA7 1347 aa13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 PCDH11YQ9BZA8 1340 aa13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 AGERQ15109 404 aa13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 RGPD4Q7Z3J3 1758 aa13.47□□□□□ -0.25
AC055748.1-201ENST00000489836 RFC5P40937 340 aa13.46□□□□□ -0.25
AC055748.1-201ENST00000489836 CTC1Q2NKJ3 1217 aa13.46□□□□□ -0.25
AC055748.1-201ENST00000489836 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
AC055748.1-201ENST00000489836 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
AC055748.1-201ENST00000489836 KDRP35968 1356 aa13.45□□□□□ -0.26
AC055748.1-201ENST00000489836 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
AC055748.1-201ENST00000489836 SMCPP49901 116 aaPredicted RBP13.45□□□□□ -0.26
AC055748.1-201ENST00000489836 NR6A1Q15406 480 aa13.45□□□□□ -0.26
AC055748.1-201ENST00000489836 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
AC055748.1-201ENST00000489836 TXNRD1Q16881 649 aa13.44□□□□□ -0.26
AC055748.1-201ENST00000489836 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
AC055748.1-201ENST00000489836 NUP188Q5SRE5 1749 aa13.43□□□□□ -0.26
AC055748.1-201ENST00000489836 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
AC055748.1-201ENST00000489836 ARMC2Q8NEN0 867 aa13.43□□□□□ -0.26
AC055748.1-201ENST00000489836 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
AC055748.1-201ENST00000489836 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 USP17L8P0C7I0 530 aa13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 PHKG2P15735 406 aa13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 IFNL2Q8IZJ0 200 aa13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 FAM174AQ8TBP5 190 aa13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 EPS8L1Q8TE68 723 aa13.42□□□□□ -0.26
AC055748.1-201ENST00000489836 PPP2R1AP30153 589 aa13.41□□□□□ -0.26
AC055748.1-201ENST00000489836 CNGB1Q14028 1251 aaPredicted RBP13.41□□□□□ -0.26
AC055748.1-201ENST00000489836 ARID5BQ14865 1188 aa13.41□□□□□ -0.26
AC055748.1-201ENST00000489836 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms