RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 C1QTNF8P60827 252 aa24.37■■□□□ 1.49
EPHB4-207ENST00000489808 GCKRQ14397 625 aa24.37■■□□□ 1.49
EPHB4-207ENST00000489808 MRPL50Q8N5N7 158 aaKnown RBP24.37■■□□□ 1.49
EPHB4-207ENST00000489808 FER1L6Q2WGJ9 1857 aa24.36■■□□□ 1.49
EPHB4-207ENST00000489808 IARSP41252 1262 aaKnown RBP24.36■■□□□ 1.49
EPHB4-207ENST00000489808 DPY19L2Q6NUT2 758 aa24.36■■□□□ 1.49
EPHB4-207ENST00000489808 TMC4Q7Z404 712 aa24.36■■□□□ 1.49
EPHB4-207ENST00000489808 CELF1Q92879 486 aaKnown RBP24.36■■□□□ 1.49
EPHB4-207ENST00000489808 BEND3Q5T5X7 828 aa24.35■■□□□ 1.49
EPHB4-207ENST00000489808 SSH1Q8WYL5 1049 aa24.35■■□□□ 1.49
EPHB4-207ENST00000489808 RRAGCQ9HB90 399 aa24.35■■□□□ 1.49
EPHB4-207ENST00000489808 RPS8P62241 208 aaKnown RBP24.34■■□□□ 1.49
EPHB4-207ENST00000489808 CCDC152Q4G0S7 254 aa24.34■■□□□ 1.49
EPHB4-207ENST00000489808 UBE3BQ7Z3V4 1068 aa24.33■■□□□ 1.49
EPHB4-207ENST00000489808 MPNDQ8N594 471 aa24.33■■□□□ 1.49
EPHB4-207ENST00000489808 RTFDC1Q9BY42 306 aaPredicted RBP24.33■■□□□ 1.49
EPHB4-207ENST00000489808 SEC31BQ9NQW1 1179 aa24.33■■□□□ 1.49
EPHB4-207ENST00000489808 CT47B1P0C2W7 299 aaPredicted RBP24.32■■□□□ 1.48
EPHB4-207ENST00000489808 CASP7P55210 303 aa24.32■■□□□ 1.48
EPHB4-207ENST00000489808 CACNA1SQ13698 1873 aa24.32■■□□□ 1.48
EPHB4-207ENST00000489808 CTSWP56202 376 aa24.31■■□□□ 1.48
EPHB4-207ENST00000489808 ALDH1L2Q3SY69 923 aa24.31■■□□□ 1.48
EPHB4-207ENST00000489808 DPP8Q6V1X1 898 aaPredicted RBP24.31■■□□□ 1.48
EPHB4-207ENST00000489808 TTLL11Q8NHH1 800 aa24.31■■□□□ 1.48
EPHB4-207ENST00000489808 CCDC85AQ96PX6 553 aaPredicted RBP24.31■■□□□ 1.48
EPHB4-207ENST00000489808 VPS33BQ9H267 617 aa24.31■■□□□ 1.48
EPHB4-207ENST00000489808 HNRNPUQ00839 825 aaKnown RBP eCLIP24.3■■□□□ 1.48
EPHB4-207ENST00000489808 SUPT20HQ8NEM7 779 aa24.3■■□□□ 1.48
EPHB4-207ENST00000489808 JDP2Q8WYK2 163 aa24.3■■□□□ 1.48
EPHB4-207ENST00000489808 PLA2G12BQ9BX93 195 aa24.3■■□□□ 1.48
EPHB4-207ENST00000489808 FZD9O00144 591 aa24.29■■□□□ 1.48
EPHB4-207ENST00000489808 DDNO94850 711 aaPredicted RBP24.29■■□□□ 1.48
EPHB4-207ENST00000489808 SLC4A10Q6U841 1118 aa24.29■■□□□ 1.48
EPHB4-207ENST00000489808 DDX60Q8IY21 1712 aaKnown RBP24.29■■□□□ 1.48
EPHB4-207ENST00000489808 CACNA1FO60840 1977 aa24.29■■□□□ 1.48
EPHB4-207ENST00000489808 TOMM70O94826 608 aa24.28■■□□□ 1.48
EPHB4-207ENST00000489808 VEGFAP15692 232 aaPredicted RBP24.28■■□□□ 1.48
EPHB4-207ENST00000489808 LARGE2Q8N3Y3 721 aa24.28■■□□□ 1.48
EPHB4-207ENST00000489808 BCL2L13Q9BXK5 485 aa24.28■■□□□ 1.48
EPHB4-207ENST00000489808 PTPRCP08575 1304 aa24.28■■□□□ 1.48
EPHB4-207ENST00000489808 LAMB2P55268 1798 aa24.27■■□□□ 1.48
EPHB4-207ENST00000489808 POTECB2RU33 542 aa24.27■■□□□ 1.48
EPHB4-207ENST00000489808 ALDH1L1O75891 902 aa24.27■■□□□ 1.48
EPHB4-207ENST00000489808 SRCIN1Q9C0H9 1055 aa24.27■■□□□ 1.48
EPHB4-207ENST00000489808 NSFL1CQ9UNZ2 370 aaKnown RBP24.27■■□□□ 1.48
EPHB4-207ENST00000489808 PPIP5K2O43314 1243 aa24.26■■□□□ 1.47
EPHB4-207ENST00000489808 GREM2Q9H772 168 aa24.26■■□□□ 1.47
EPHB4-207ENST00000489808 SMC4Q9NTJ3 1288 aa24.26■■□□□ 1.47
EPHB4-207ENST00000489808 CCDC88AQ3V6T2 1871 aa24.26■■□□□ 1.47
EPHB4-207ENST00000489808 CSF1RP07333 972 aa24.25■■□□□ 1.47
EPHB4-207ENST00000489808 GPSM2P81274 684 aa24.25■■□□□ 1.47
EPHB4-207ENST00000489808 AOC3Q16853 763 aa24.25■■□□□ 1.47
EPHB4-207ENST00000489808 ANKRD18AQ8IVF6 992 aa24.25■■□□□ 1.47
EPHB4-207ENST00000489808 C16orf71Q8IYS4 520 aaPredicted RBP24.25■■□□□ 1.47
EPHB4-207ENST00000489808 GRM8O00222 908 aa24.24■■□□□ 1.47
EPHB4-207ENST00000489808 CDC5LQ99459 802 aaKnown RBP24.24■■□□□ 1.47
EPHB4-207ENST00000489808 C9orf78Q9NZ63 289 aaPredicted RBP24.24■■□□□ 1.47
EPHB4-207ENST00000489808 ZNF541Q9H0D2 1346 aa24.24■■□□□ 1.47
EPHB4-207ENST00000489808 BRPF1P55201 1214 aaPredicted RBP24.23■■□□□ 1.47
EPHB4-207ENST00000489808 EIF6P56537 245 aaKnown RBP24.23■■□□□ 1.47
EPHB4-207ENST00000489808 KIAA2012Q0VF49 1180 aa24.23■■□□□ 1.47
EPHB4-207ENST00000489808 NIM1KQ8IY84 436 aa24.23■■□□□ 1.47
EPHB4-207ENST00000489808 POLLQ9UGP5 575 aa24.23■■□□□ 1.47
EPHB4-207ENST00000489808 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
EPHB4-207ENST00000489808 RARSP54136 660 aaKnown RBP24.22■■□□□ 1.47
EPHB4-207ENST00000489808 FOXO4P98177 505 aa24.22■■□□□ 1.47
EPHB4-207ENST00000489808 RBM46Q8TBY0 533 aaKnown RBP24.22■■□□□ 1.47
EPHB4-207ENST00000489808 PODXL2Q9NZ53 605 aa24.22■■□□□ 1.47
EPHB4-207ENST00000489808 L3MBTL3Q96JM7 780 aaPredicted RBP24.21■■□□□ 1.47
EPHB4-207ENST00000489808 BSDC1Q9NW68 430 aaPredicted RBP24.21■■□□□ 1.47
EPHB4-207ENST00000489808 DICER1Q9UPY3 1922 aaKnown RBP24.21■■□□□ 1.47
EPHB4-207ENST00000489808 COL4A1P02462 1669 aa24.21■■□□□ 1.47
EPHB4-207ENST00000489808 TAF1P21675 1872 aa24.2■■□□□ 1.46
EPHB4-207ENST00000489808 C6orf229H3BNL8 230 aa24.2■■□□□ 1.46
EPHB4-207ENST00000489808 ITGA6P23229 1130 aa24.2■■□□□ 1.46
EPHB4-207ENST00000489808 GPC2Q8N158 579 aa24.2■■□□□ 1.46
EPHB4-207ENST00000489808 TBC1D16Q8TBP0 767 aa24.2■■□□□ 1.46
EPHB4-207ENST00000489808 ZNRF3Q9ULT6 936 aa24.2■■□□□ 1.46
EPHB4-207ENST00000489808 NOB1Q9ULX3 412 aaKnown RBP24.2■■□□□ 1.46
EPHB4-207ENST00000489808 COL4A5P29400 1685 aa24.19■■□□□ 1.46
EPHB4-207ENST00000489808 WASHC4Q2M389 1173 aa24.19■■□□□ 1.46
EPHB4-207ENST00000489808 ANKIB1Q9P2G1 1089 aa24.19■■□□□ 1.46
EPHB4-207ENST00000489808 TIAM2Q8IVF5 1701 aa24.18■■□□□ 1.46
EPHB4-207ENST00000489808 FAM161AQ3B820 660 aa24.18■■□□□ 1.46
EPHB4-207ENST00000489808 EPHA10Q5JZY3 1008 aa24.18■■□□□ 1.46
EPHB4-207ENST00000489808 MINPP1Q9UNW1 487 aa24.18■■□□□ 1.46
EPHB4-207ENST00000489808 UTYO14607 1347 aa24.17■■□□□ 1.46
EPHB4-207ENST00000489808 IQCA1LA6NCM1 817 aa24.17■■□□□ 1.46
EPHB4-207ENST00000489808 NBPF7P0C2Y1 421 aaPredicted RBP24.17■■□□□ 1.46
EPHB4-207ENST00000489808 IGHMBP2P38935 993 aaKnown RBP24.17■■□□□ 1.46
EPHB4-207ENST00000489808 LMBR1LQ6UX01 489 aa24.17■■□□□ 1.46
EPHB4-207ENST00000489808 EYA3Q99504 573 aa24.17■■□□□ 1.46
EPHB4-207ENST00000489808 GGA1Q9UJY5 639 aa24.17■■□□□ 1.46
EPHB4-207ENST00000489808 GJA3Q9Y6H8 435 aa24.17■■□□□ 1.46
EPHB4-207ENST00000489808 RIMBP2O15034 1052 aa24.16■■□□□ 1.46
EPHB4-207ENST00000489808 CXCL9Q07325 125 aa24.16■■□□□ 1.46
EPHB4-207ENST00000489808 FSTL1Q12841 308 aa24.16■■□□□ 1.46
EPHB4-207ENST00000489808 ANKRD18BA2A2Z9 1011 aa24.15■■□□□ 1.46
EPHB4-207ENST00000489808 SUCLG2Q96I99 432 aa24.15■■□□□ 1.46
EPHB4-207ENST00000489808 ZC3H12CQ9C0D7 883 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms