RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 BABAM1Q9NWV8 329 aa29.31■■■□□ 2.28
HOXA9-205ENST00000489695 NLRP10Q86W26 655 aa29.3■■■□□ 2.28
HOXA9-205ENST00000489695 GLIS2Q9BZE0 524 aaPredicted RBP29.3■■■□□ 2.28
HOXA9-205ENST00000489695 ANXA1P04083 346 aa29.29■■■□□ 2.28
HOXA9-205ENST00000489695 CA12O43570 354 aa29.28■■■□□ 2.28
HOXA9-205ENST00000489695 HCLS1P14317 486 aaPredicted RBP29.28■■■□□ 2.28
HOXA9-205ENST00000489695 HIRAP54198 1017 aaPredicted RBP29.28■■■□□ 2.28
HOXA9-205ENST00000489695 TNIP1Q15025 636 aa29.28■■■□□ 2.28
HOXA9-205ENST00000489695 HSP90AB3PQ58FF7 597 aa29.28■■■□□ 2.28
HOXA9-205ENST00000489695 RAD17O75943 681 aa29.27■■■□□ 2.28
HOXA9-205ENST00000489695 RGS19P49795 217 aa29.27■■■□□ 2.28
HOXA9-205ENST00000489695 COPS6Q7L5N1 327 aa29.27■■■□□ 2.28
HOXA9-205ENST00000489695 TSKSQ9UJT2 592 aa29.27■■■□□ 2.28
HOXA9-205ENST00000489695 CCDC85CA6NKD9 419 aa29.26■■■□□ 2.27
HOXA9-205ENST00000489695 BRPF1P55201 1214 aaPredicted RBP29.26■■■□□ 2.27
HOXA9-205ENST00000489695 GRAPQ13588 217 aa29.26■■■□□ 2.27
HOXA9-205ENST00000489695 DDX46Q7L014 1031 aaKnown RBP29.26■■■□□ 2.27
HOXA9-205ENST00000489695 GRAPLQ8TC17 118 aaPredicted RBP29.26■■■□□ 2.27
HOXA9-205ENST00000489695 BCL2L13Q9BXK5 485 aa29.26■■■□□ 2.27
HOXA9-205ENST00000489695 ANKRD36CQ5JPF3 1778 aa29.26■■■□□ 2.27
HOXA9-205ENST00000489695 TCIRG1Q13488 830 aa29.25■■■□□ 2.27
HOXA9-205ENST00000489695 LAMB2P55268 1798 aa29.25■■■□□ 2.27
HOXA9-205ENST00000489695 YDJCA8MPS7 323 aa29.24■■■□□ 2.27
HOXA9-205ENST00000489695 RIPK4P57078 832 aa29.24■■■□□ 2.27
HOXA9-205ENST00000489695 CDC37L1Q7L3B6 337 aa29.24■■■□□ 2.27
HOXA9-205ENST00000489695 TRPM4Q8TD43 1214 aa29.24■■■□□ 2.27
HOXA9-205ENST00000489695 XAGE3Q8WTP9 111 aa29.24■■■□□ 2.27
HOXA9-205ENST00000489695 TRMT112Q9UI30 125 aaKnown RBP29.24■■■□□ 2.27
HOXA9-205ENST00000489695 SH3TC1Q8TE82 1336 aa29.23■■■□□ 2.27
HOXA9-205ENST00000489695 SLC34A2O95436 690 aa29.23■■■□□ 2.27
HOXA9-205ENST00000489695 TMC4Q7Z404 712 aa29.23■■■□□ 2.27
HOXA9-205ENST00000489695 CNOT7Q9UIV1 285 aaKnown RBP29.23■■■□□ 2.27
HOXA9-205ENST00000489695 AIMP1Q12904 312 aaKnown RBP29.22■■■□□ 2.27
HOXA9-205ENST00000489695 MLLT1Q03111 559 aaPredicted RBP29.21■■■□□ 2.27
HOXA9-205ENST00000489695 DUOX1Q9NRD9 1551 aa29.21■■■□□ 2.27
HOXA9-205ENST00000489695 SHTN1A0MZ66 631 aa29.2■■■□□ 2.26
HOXA9-205ENST00000489695 ZNF408Q9H9D4 720 aa29.2■■■□□ 2.26
HOXA9-205ENST00000489695 H7C1D1 291 aa29.19■■■□□ 2.26
HOXA9-205ENST00000489695 NECTIN2Q92692 538 aa29.19■■■□□ 2.26
HOXA9-205ENST00000489695 DPF2Q92785 391 aa29.19■■■□□ 2.26
HOXA9-205ENST00000489695 TMPOP42166 694 aaKnown RBP29.18■■■□□ 2.26
HOXA9-205ENST00000489695 MICALL2Q8IY33 904 aa29.18■■■□□ 2.26
HOXA9-205ENST00000489695 LRRC37AA6NMS7 1700 aa29.17■■■□□ 2.26
HOXA9-205ENST00000489695 LMOD3Q0VAK6 560 aa29.17■■■□□ 2.26
HOXA9-205ENST00000489695 NOGQ13253 232 aa29.17■■■□□ 2.26
HOXA9-205ENST00000489695 MCOLN1Q9GZU1 580 aa29.17■■■□□ 2.26
HOXA9-205ENST00000489695 USP48Q86UV5 1035 aa29.16■■■□□ 2.26
HOXA9-205ENST00000489695 WASHC4Q2M389 1173 aa29.15■■■□□ 2.26
HOXA9-205ENST00000489695 ZBTB12Q9Y330 459 aaPredicted RBP29.15■■■□□ 2.26
HOXA9-205ENST00000489695 PSMD14O00487 310 aa29.14■■■□□ 2.26
HOXA9-205ENST00000489695 CHL1O00533 1208 aa29.14■■■□□ 2.26
HOXA9-205ENST00000489695 ZIC5Q96T25 663 aa29.14■■■□□ 2.26
HOXA9-205ENST00000489695 TAF1P21675 1872 aa29.14■■■□□ 2.26
HOXA9-205ENST00000489695 HUNKP57058 714 aa29.13■■■□□ 2.25
HOXA9-205ENST00000489695 SF3B3Q15393 1217 aaKnown RBP29.13■■■□□ 2.25
HOXA9-205ENST00000489695 SAMD7Q7Z3H4 446 aa29.13■■■□□ 2.25
HOXA9-205ENST00000489695 KRT24Q2M2I5 525 aa29.12■■■□□ 2.25
HOXA9-205ENST00000489695 DLK2Q6UY11 383 aa29.12■■■□□ 2.25
HOXA9-205ENST00000489695 PLBD2Q8NHP8 589 aa29.12■■■□□ 2.25
HOXA9-205ENST00000489695 CELF1Q92879 486 aaKnown RBP29.12■■■□□ 2.25
HOXA9-205ENST00000489695 CHPF2Q9P2E5 772 aa29.12■■■□□ 2.25
HOXA9-205ENST00000489695 NSFL1CQ9UNZ2 370 aaKnown RBP29.12■■■□□ 2.25
HOXA9-205ENST00000489695 ISCA1Q9BUE6 129 aa29.11■■■□□ 2.25
HOXA9-205ENST00000489695 DBNDD1Q9H9R9 158 aa29.11■■■□□ 2.25
HOXA9-205ENST00000489695 POLLQ9UGP5 575 aa29.11■■■□□ 2.25
HOXA9-205ENST00000489695 EGFRP00533 1210 aa29.1■■■□□ 2.25
HOXA9-205ENST00000489695 RPS12P25398 132 aaKnown RBP29.1■■■□□ 2.25
HOXA9-205ENST00000489695 ANKRD13DQ6ZTN6 518 aa29.1■■■□□ 2.25
HOXA9-205ENST00000489695 KRT26Q7Z3Y9 468 aa29.1■■■□□ 2.25
HOXA9-205ENST00000489695 ZNF428Q96B54 188 aa29.1■■■□□ 2.25
HOXA9-205ENST00000489695 FAM89AQ96GI7 184 aa29.1■■■□□ 2.25
HOXA9-205ENST00000489695 DDX60Q8IY21 1712 aaKnown RBP29.1■■■□□ 2.25
HOXA9-205ENST00000489695 FAM155AB1AL88 458 aaPredicted RBP29.09■■■□□ 2.25
HOXA9-205ENST00000489695 CASP8AP2Q9UKL3 1982 aa29.09■■■□□ 2.25
HOXA9-205ENST00000489695 GPSM2P81274 684 aa29.08■■■□□ 2.25
HOXA9-205ENST00000489695 DGKZQ13574 1117 aa29.08■■■□□ 2.25
HOXA9-205ENST00000489695 TBC1D10BQ4KMP7 808 aaPredicted RBP29.08■■■□□ 2.25
HOXA9-205ENST00000489695 RIMBP2O15034 1052 aa29.07■■■□□ 2.24
HOXA9-205ENST00000489695 RGMBQ6NW40 437 aa29.07■■■□□ 2.24
HOXA9-205ENST00000489695 RTL9Q8NET4 1388 aa29.07■■■□□ 2.24
HOXA9-205ENST00000489695 GBA2Q9HCG7 927 aaPredicted RBP29.07■■■□□ 2.24
HOXA9-205ENST00000489695 KCNQ5Q9NR82 932 aa29.07■■■□□ 2.24
HOXA9-205ENST00000489695 TNRC18O15417 2968 aaPredicted RBP29.06■■■□□ 2.24
HOXA9-205ENST00000489695 C6orf229H3BNL8 230 aa29.06■■■□□ 2.24
HOXA9-205ENST00000489695 ECE2O60344 883 aa29.06■■■□□ 2.24
HOXA9-205ENST00000489695 HOXB7P09629 217 aa29.06■■■□□ 2.24
HOXA9-205ENST00000489695 HDGFL1Q5TGJ6 251 aa29.06■■■□□ 2.24
HOXA9-205ENST00000489695 COL4A1P02462 1669 aa29.05■■■□□ 2.24
HOXA9-205ENST00000489695 TRIM28Q13263 835 aaKnown RBP29.05■■■□□ 2.24
HOXA9-205ENST00000489695 RALBP1Q15311 655 aa29.05■■■□□ 2.24
HOXA9-205ENST00000489695 C2orf69Q8N8R5 385 aa29.05■■■□□ 2.24
HOXA9-205ENST00000489695 CCDC102AQ96A19 550 aa29.05■■■□□ 2.24
HOXA9-205ENST00000489695 DCPSQ96C86 337 aaKnown RBP29.05■■■□□ 2.24
HOXA9-205ENST00000489695 EYA3Q99504 573 aa29.05■■■□□ 2.24
HOXA9-205ENST00000489695 SAGE1Q9NXZ1 904 aa29.05■■■□□ 2.24
HOXA9-205ENST00000489695 DBF4Q9UBU7 674 aaPredicted RBP29.05■■■□□ 2.24
HOXA9-205ENST00000489695 ATP5J2-PTCD1G3V325 749 aa29.04■■■□□ 2.24
HOXA9-205ENST00000489695 NEUROD2Q15784 382 aa29.04■■■□□ 2.24
HOXA9-205ENST00000489695 TBC1D16Q8TBP0 767 aa29.04■■■□□ 2.24
HOXA9-205ENST00000489695 CFAP44Q96MT7 982 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms