RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 MED23Q9ULK4 1368 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 A0A0G2JS52 829 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 AK2P54819 239 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
COL9A1-208ENST00000489611 KCNJ4P48050 445 aa17.93■□□□□ 0.46
COL9A1-208ENST00000489611 PRIM1P49642 420 aaKnown RBP17.93■□□□□ 0.46
COL9A1-208ENST00000489611 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-208ENST00000489611 TSGA10IPQ3SY00 556 aa17.93■□□□□ 0.46
COL9A1-208ENST00000489611 ANP32BQ92688 251 aaKnown RBP17.93■□□□□ 0.46
COL9A1-208ENST00000489611 PDRG1Q9NUG6 133 aa17.93■□□□□ 0.46
COL9A1-208ENST00000489611 PRPF40AO75400 957 aaKnown RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 PTH1RQ03431 593 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 KRT32Q14532 448 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 ACSBG1Q96GR2 724 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 BOLA2Q9H3K6 86 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 RBM8AQ9Y5S9 174 aaKnown RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 TJP1Q07157 1748 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 SPEF2Q9C093 1822 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 CIAO1O76071 339 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 IL15P40933 162 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 FOXO4P98177 505 aa17.92■□□□□ 0.46
COL9A1-208ENST00000489611 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 SYAP1Q96A49 352 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 JAKMIP1Q96N16 626 aaKnown RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 TLR7Q9NYK1 1049 aaKnown RBP17.92■□□□□ 0.46
COL9A1-208ENST00000489611 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
COL9A1-208ENST00000489611 TFCP2Q12800 502 aa17.91■□□□□ 0.46
COL9A1-208ENST00000489611 CREB3L3Q68CJ9 461 aa17.91■□□□□ 0.46
COL9A1-208ENST00000489611 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
COL9A1-208ENST00000489611 KLHDC4Q8TBB5 520 aa17.91■□□□□ 0.46
COL9A1-208ENST00000489611 HAUS7Q99871 368 aa17.91■□□□□ 0.46
COL9A1-208ENST00000489611 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
COL9A1-208ENST00000489611 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
COL9A1-208ENST00000489611 BCL9O00512 1426 aa17.9■□□□□ 0.46
COL9A1-208ENST00000489611 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
COL9A1-208ENST00000489611 SMC3Q9UQE7 1217 aa17.9■□□□□ 0.46
COL9A1-208ENST00000489611 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
COL9A1-208ENST00000489611 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
COL9A1-208ENST00000489611 FAM227BQ96M60 508 aa17.9■□□□□ 0.46
COL9A1-208ENST00000489611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.9■□□□□ 0.46
COL9A1-208ENST00000489611 ZSCAN23Q3MJ62 389 aa17.89■□□□□ 0.45
COL9A1-208ENST00000489611 CAVIN1Q6NZI2 390 aaKnown RBP17.89■□□□□ 0.45
COL9A1-208ENST00000489611 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.88■□□□□ 0.45
COL9A1-208ENST00000489611 CSPP1Q1MSJ5 1256 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 GAS2L3Q86XJ1 694 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 TMEM87AQ8NBN3 555 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 SLC27A2O14975 620 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 STARD3NLO95772 234 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
COL9A1-208ENST00000489611 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-208ENST00000489611 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-208ENST00000489611 A0A0D9SFI3 127 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 STX6O43752 255 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 PHF14O94880 888 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 A1BGP04217 495 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 ZSCAN22P10073 491 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-208ENST00000489611 LRRFIP1Q32MZ4 808 aaKnown RBP17.87■□□□□ 0.45
COL9A1-208ENST00000489611 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.87■□□□□ 0.45
COL9A1-208ENST00000489611 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 ITGB4P16144 1822 aa17.87■□□□□ 0.45
COL9A1-208ENST00000489611 CCDC173Q0VFZ6 552 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 TCIRG1Q13488 830 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 GPT2Q8TD30 523 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 FBXO41Q8TF61 875 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 ATRNO75882 1429 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 EYA2O00167 538 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 KCNQ2O43526 872 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 TAF5LO75529 589 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 PDCP20941 246 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 NASPP49321 788 aaPredicted RBP17.86■□□□□ 0.45
COL9A1-208ENST00000489611 ADCK5Q3MIX3 580 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 MCMDC2Q4G0Z9 681 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 KIF6Q6ZMV9 814 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 ARXQ96QS3 562 aa17.86■□□□□ 0.45
COL9A1-208ENST00000489611 QTRT2Q9H974 415 aaKnown RBP17.86■□□□□ 0.45
COL9A1-208ENST00000489611 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
COL9A1-208ENST00000489611 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
COL9A1-208ENST00000489611 ATG9AQ7Z3C6 839 aa17.85■□□□□ 0.45
COL9A1-208ENST00000489611 PLA2G12BQ9BX93 195 aa17.85■□□□□ 0.45
COL9A1-208ENST00000489611 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 SLC4A9Q96Q91 983 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 HELLSQ9NRZ9 838 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 KAT6BQ8WYB5 2073 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
COL9A1-208ENST00000489611 HMGB1P09429 215 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms