RNA–Protein interactions for RNA: ENST00000489446.1

KLHL29-204, Transcript of kelch like family member 29, humanhuman

TSL 1 (best)

Gene KLHL29, Length 2,456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29-204ENST00000489446 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
KLHL29-204ENST00000489446 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 IL2RBP14784 551 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
KLHL29-204ENST00000489446 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 H7C1W4 665 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 SLC27A2O14975 620 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 OFD1O75665 1012 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 ATP5JP18859 108 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 FOXO4P98177 505 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 CCDC83Q8IWF9 413 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
KLHL29-204ENST00000489446 DBNDD2Q9BQY9 259 aa17.04■□□□□ 0.32
KLHL29-204ENST00000489446 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
KLHL29-204ENST00000489446 PDIA4P13667 645 aaKnown RBP17.03■□□□□ 0.32
KLHL29-204ENST00000489446 SYT1P21579 422 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
KLHL29-204ENST00000489446 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 TAF6LQ9Y6J9 622 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 ABCA3Q99758 1704 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 MBD3O95983 291 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 CHGBP05060 677 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
KLHL29-204ENST00000489446 PAPPAQ13219 1627 aa17.02■□□□□ 0.32
KLHL29-204ENST00000489446 SYCE3A1L190 88 aa17.02■□□□□ 0.32
KLHL29-204ENST00000489446 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
KLHL29-204ENST00000489446 ARID3AQ99856 593 aa17.02■□□□□ 0.32
KLHL29-204ENST00000489446 ZBTB3Q9H5J0 574 aa17.02■□□□□ 0.32
KLHL29-204ENST00000489446 TJP1Q07157 1748 aa17.02■□□□□ 0.31
KLHL29-204ENST00000489446 STX6O43752 255 aa17.02■□□□□ 0.31
KLHL29-204ENST00000489446 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.31
KLHL29-204ENST00000489446 ME3Q16798 604 aa17.02■□□□□ 0.31
KLHL29-204ENST00000489446 USP48Q86UV5 1035 aa17.02■□□□□ 0.31
KLHL29-204ENST00000489446 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.31
KLHL29-204ENST00000489446 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
KLHL29-204ENST00000489446 GJB2P29033 226 aa17.01■□□□□ 0.31
KLHL29-204ENST00000489446 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
KLHL29-204ENST00000489446 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
KLHL29-204ENST00000489446 JCADQ9P266 1359 aa17■□□□□ 0.31
KLHL29-204ENST00000489446 TERF1P54274 439 aa17■□□□□ 0.31
KLHL29-204ENST00000489446 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
KLHL29-204ENST00000489446 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
KLHL29-204ENST00000489446 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
KLHL29-204ENST00000489446 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
KLHL29-204ENST00000489446 TAF5LO75529 589 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
KLHL29-204ENST00000489446 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 NECAB1Q8N987 351 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 SH2B1Q9NRF2 756 aaPredicted RBP16.99■□□□□ 0.31
KLHL29-204ENST00000489446 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 PPP1R9BQ96SB3 815 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
KLHL29-204ENST00000489446 PSMA5P28066 241 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 EVA1CP58658 441 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
KLHL29-204ENST00000489446 ZNF609O15014 1411 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 TNS2Q63HR2 1409 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 F13A1P00488 732 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 CCDC129Q6ZRS4 1044 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
KLHL29-204ENST00000489446 HAUS7Q99871 368 aa16.98■□□□□ 0.31
KLHL29-204ENST00000489446 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
KLHL29-204ENST00000489446 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
KLHL29-204ENST00000489446 ZSCAN30Q86W11 494 aa16.97■□□□□ 0.31
KLHL29-204ENST00000489446 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
KLHL29-204ENST00000489446 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
KLHL29-204ENST00000489446 ZNF594Q96JF6 807 aaPredicted RBP16.97■□□□□ 0.31
KLHL29-204ENST00000489446 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
KLHL29-204ENST00000489446 TIMM10P62072 90 aa16.96■□□□□ 0.31
KLHL29-204ENST00000489446 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
KLHL29-204ENST00000489446 ANP32BQ92688 251 aaKnown RBP16.96■□□□□ 0.31
KLHL29-204ENST00000489446 MTMR6Q9Y217 621 aa16.96■□□□□ 0.31
KLHL29-204ENST00000489446 RPS6KB1P23443 525 aa16.96■□□□□ 0.31
KLHL29-204ENST00000489446 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
KLHL29-204ENST00000489446 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
KLHL29-204ENST00000489446 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
KLHL29-204ENST00000489446 TSGA10IPQ3SY00 556 aa16.95■□□□□ 0.3
KLHL29-204ENST00000489446 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
KLHL29-204ENST00000489446 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
KLHL29-204ENST00000489446 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 MSNP26038 577 aaKnown RBP16.94■□□□□ 0.3
KLHL29-204ENST00000489446 SLFNL1Q499Z3 407 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 TPRNQ4KMQ1 711 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 IL15P40933 162 aaPredicted RBP16.94■□□□□ 0.3
KLHL29-204ENST00000489446 DMTNQ08495 405 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 UTP14CQ5TAP6 766 aaKnown RBP16.94■□□□□ 0.3
KLHL29-204ENST00000489446 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 PUS3Q9BZE2 481 aaKnown RBP16.94■□□□□ 0.3
KLHL29-204ENST00000489446 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
KLHL29-204ENST00000489446 EYA2O00167 538 aa16.93■□□□□ 0.3
KLHL29-204ENST00000489446 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms