RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FKBP1BP68106 108 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 SREBF2Q12772 1141 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 MPNDQ8N594 471 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 CDCA5Q96FF9 252 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-233ENST00000489352 ATP6V0A2Q9Y487 856 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 TM4SF4P48230 202 aa15.62■□□□□ 0.09
HDAC6-233ENST00000489352 KIAA2012Q0VF49 1180 aa15.62■□□□□ 0.09
HDAC6-233ENST00000489352 MORC1Q86VD1 984 aa15.62■□□□□ 0.09
HDAC6-233ENST00000489352 OTUD5Q96G74 571 aa15.62■□□□□ 0.09
HDAC6-233ENST00000489352 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
HDAC6-233ENST00000489352 HLFQ16534 295 aa15.61■□□□□ 0.09
HDAC6-233ENST00000489352 RTFDC1Q9BY42 306 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-233ENST00000489352 SIPA1L3O60292 1781 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-233ENST00000489352 PITPNM2Q9BZ72 1349 aa15.61■□□□□ 0.09
HDAC6-233ENST00000489352 NUP98P52948 1817 aa15.61■□□□□ 0.09
HDAC6-233ENST00000489352 BRCA2P51587 3418 aa15.61■□□□□ 0.09
HDAC6-233ENST00000489352 BTBD11A6QL63 1104 aa15.6■□□□□ 0.09
HDAC6-233ENST00000489352 SLC51AQ86UW1 340 aa15.6■□□□□ 0.09
HDAC6-233ENST00000489352 GGA3Q9NZ52 723 aa15.6■□□□□ 0.09
HDAC6-233ENST00000489352 RIC1Q4ADV7 1423 aa15.6■□□□□ 0.09
HDAC6-233ENST00000489352 GNAT3A8MTJ3 354 aa15.59■□□□□ 0.09
HDAC6-233ENST00000489352 MKRN3Q13064 507 aaKnown RBP15.59■□□□□ 0.09
HDAC6-233ENST00000489352 TTLL12Q14166 644 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-233ENST00000489352 OTOP1Q7RTM1 612 aa15.59■□□□□ 0.09
HDAC6-233ENST00000489352 NLRP3Q96P20 1036 aa15.59■□□□□ 0.09
HDAC6-233ENST00000489352 PSMD14O00487 310 aa15.58■□□□□ 0.08
HDAC6-233ENST00000489352 ALDH1A1P00352 501 aa15.58■□□□□ 0.08
HDAC6-233ENST00000489352 EGFRP00533 1210 aa15.58■□□□□ 0.08
HDAC6-233ENST00000489352 RPS12P25398 132 aaKnown RBP15.58■□□□□ 0.08
HDAC6-233ENST00000489352 KIF4BQ2VIQ3 1234 aa15.58■□□□□ 0.08
HDAC6-233ENST00000489352 RBM27Q9P2N5 1060 aaKnown RBP15.58■□□□□ 0.08
HDAC6-233ENST00000489352 HTTP42858 3142 aa15.58■□□□□ 0.08
HDAC6-233ENST00000489352 YDJCA8MPS7 323 aa15.57■□□□□ 0.08
HDAC6-233ENST00000489352 UBE2Q2LH0YL09 131 aa15.57■□□□□ 0.08
HDAC6-233ENST00000489352 SNRPA1P09661 255 aaKnown RBP15.57■□□□□ 0.08
HDAC6-233ENST00000489352 SLC4A8Q2Y0W8 1093 aa15.57■□□□□ 0.08
HDAC6-233ENST00000489352 BBOX1O75936 387 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 TCIRG1Q13488 830 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 SP8Q8IXZ3 490 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 DPF3Q92784 378 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 ERO1AQ96HE7 468 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 CFHR5Q9BXR6 569 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 PTPN22Q9Y2R2 807 aa15.56■□□□□ 0.08
HDAC6-233ENST00000489352 RANBP2P49792 3224 aaKnown RBP15.56■□□□□ 0.08
HDAC6-233ENST00000489352 NBPF11Q86T75 865 aa15.55■□□□□ 0.08
HDAC6-233ENST00000489352 KCNQ3O43525 872 aa15.54■□□□□ 0.08
HDAC6-233ENST00000489352 GPTP24298 496 aa15.54■□□□□ 0.08
HDAC6-233ENST00000489352 WASHC4Q2M389 1173 aa15.54■□□□□ 0.08
HDAC6-233ENST00000489352 ANGEL2Q5VTE6 544 aaKnown RBP15.54■□□□□ 0.08
HDAC6-233ENST00000489352 MOB2Q70IA6 237 aa15.54■□□□□ 0.08
HDAC6-233ENST00000489352 ARMC5Q96C12 935 aa15.54■□□□□ 0.08
HDAC6-233ENST00000489352 R3HDMLQ9H3Y0 253 aa15.54■□□□□ 0.08
HDAC6-233ENST00000489352 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
HDAC6-233ENST00000489352 NF2P35240 595 aa15.53■□□□□ 0.08
HDAC6-233ENST00000489352 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
HDAC6-233ENST00000489352 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
HDAC6-233ENST00000489352 PPP1R42Q7Z4L9 355 aa15.53■□□□□ 0.08
HDAC6-233ENST00000489352 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
HDAC6-233ENST00000489352 DBNDD1Q9H9R9 158 aa15.53■□□□□ 0.08
HDAC6-233ENST00000489352 ABCC4O15439 1325 aa15.52■□□□□ 0.08
HDAC6-233ENST00000489352 ERVV-1B6SEH8 477 aa15.52■□□□□ 0.08
HDAC6-233ENST00000489352 SUSD4Q5VX71 490 aa15.52■□□□□ 0.08
HDAC6-233ENST00000489352 EFCC1Q9HA90 598 aa15.52■□□□□ 0.08
HDAC6-233ENST00000489352 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-233ENST00000489352 ASTN2O75129 1339 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-233ENST00000489352 G3V3G9 751 aa15.51■□□□□ 0.07
HDAC6-233ENST00000489352 RIMBP2O15034 1052 aa15.51■□□□□ 0.07
HDAC6-233ENST00000489352 SCARF1Q14162 830 aa15.51■□□□□ 0.07
HDAC6-233ENST00000489352 DCAF8Q5TAQ9 597 aa15.51■□□□□ 0.07
HDAC6-233ENST00000489352 INHBEP58166 350 aa15.5■□□□□ 0.07
HDAC6-233ENST00000489352 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
HDAC6-233ENST00000489352 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
HDAC6-233ENST00000489352 C3orf67Q6ZVT6 689 aa15.5■□□□□ 0.07
HDAC6-233ENST00000489352 DDX46Q7L014 1031 aaKnown RBP15.5■□□□□ 0.07
HDAC6-233ENST00000489352 DDX60Q8IY21 1712 aaKnown RBP15.5■□□□□ 0.07
HDAC6-233ENST00000489352 UNC80Q8N2C7 3258 aa15.49■□□□□ 0.07
HDAC6-233ENST00000489352 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
HDAC6-233ENST00000489352 CD99L2Q8TCZ2 262 aa15.49■□□□□ 0.07
HDAC6-233ENST00000489352 C6orf229H3BNL8 230 aa15.48■□□□□ 0.07
HDAC6-233ENST00000489352 DIAPH1O60610 1272 aaKnown RBP15.48■□□□□ 0.07
HDAC6-233ENST00000489352 MYCP01106 439 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-233ENST00000489352 ARHGEF6Q15052 776 aa15.48■□□□□ 0.07
HDAC6-233ENST00000489352 ZNF333Q96JL9 665 aa15.48■□□□□ 0.07
HDAC6-233ENST00000489352 COL25A1Q9BXS0 654 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-233ENST00000489352 PANK3Q9H999 370 aa15.48■□□□□ 0.07
HDAC6-233ENST00000489352 UBN2Q6ZU65 1347 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 ECE2O60344 883 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 NTSR2O95665 410 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
HDAC6-233ENST00000489352 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-233ENST00000489352 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
HDAC6-233ENST00000489352 TAF1P21675 1872 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms