RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
C9orf16-203ENST00000489240 PDGFDQ9GZP0 370 aaPredicted RBP22.65■■□□□ 1.22
C9orf16-203ENST00000489240 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
C9orf16-203ENST00000489240 NLRP3Q96P20 1036 aa22.64■■□□□ 1.21
C9orf16-203ENST00000489240 CCDC57Q2TAC2 916 aa22.63■■□□□ 1.21
C9orf16-203ENST00000489240 CCDC152Q4G0S7 254 aa22.63■■□□□ 1.21
C9orf16-203ENST00000489240 DCTPP1Q9H773 170 aa22.63■■□□□ 1.21
C9orf16-203ENST00000489240 SPEF2Q9C093 1822 aa22.63■■□□□ 1.21
C9orf16-203ENST00000489240 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
C9orf16-203ENST00000489240 RTL9Q8NET4 1388 aa22.62■■□□□ 1.21
C9orf16-203ENST00000489240 IFIT5Q13325 482 aaKnown RBP22.61■■□□□ 1.21
C9orf16-203ENST00000489240 SF3B3Q15393 1217 aaKnown RBP22.61■■□□□ 1.21
C9orf16-203ENST00000489240 HSP90AB4PQ58FF6 505 aa22.61■■□□□ 1.21
C9orf16-203ENST00000489240 MTFR1LQ9H019 292 aa22.61■■□□□ 1.21
C9orf16-203ENST00000489240 ANKRD18BA2A2Z9 1011 aa22.6■■□□□ 1.21
C9orf16-203ENST00000489240 RFX5P48382 616 aaPredicted RBP22.6■■□□□ 1.21
C9orf16-203ENST00000489240 CCDC24Q8N4L8 307 aa22.6■■□□□ 1.21
C9orf16-203ENST00000489240 SURF6O75683 361 aaKnown RBP22.59■■□□□ 1.21
C9orf16-203ENST00000489240 FAM161AQ3B820 660 aa22.59■■□□□ 1.21
C9orf16-203ENST00000489240 CCDC85AQ96PX6 553 aaPredicted RBP22.59■■□□□ 1.21
C9orf16-203ENST00000489240 GREM2Q9H772 168 aa22.59■■□□□ 1.21
C9orf16-203ENST00000489240 COPRSQ9NQ92 184 aa22.59■■□□□ 1.21
C9orf16-203ENST00000489240 NOP58Q9Y2X3 529 aaKnown RBP22.59■■□□□ 1.21
C9orf16-203ENST00000489240 TAF1P21675 1872 aa22.58■■□□□ 1.21
C9orf16-203ENST00000489240 PSDA5PKW4 1024 aaPredicted RBP22.58■■□□□ 1.21
C9orf16-203ENST00000489240 ITGA6P23229 1130 aa22.58■■□□□ 1.21
C9orf16-203ENST00000489240 BRIP1Q9BX63 1249 aa22.58■■□□□ 1.21
C9orf16-203ENST00000489240 RAB11FIP3O75154 756 aa22.57■■□□□ 1.2
C9orf16-203ENST00000489240 ZBTB7AO95365 584 aa22.57■■□□□ 1.2
C9orf16-203ENST00000489240 PTPN12Q05209 780 aaKnown RBP22.57■■□□□ 1.2
C9orf16-203ENST00000489240 G3BP1Q13283 466 aaKnown RBP eCLIP22.57■■□□□ 1.2
C9orf16-203ENST00000489240 TAF7LQ5H9L4 462 aa22.57■■□□□ 1.2
C9orf16-203ENST00000489240 EXOC6BQ9Y2D4 811 aa22.57■■□□□ 1.2
C9orf16-203ENST00000489240 KIF13BQ9NQT8 1826 aa22.57■■□□□ 1.2
C9orf16-203ENST00000489240 POLD1P28340 1107 aa22.56■■□□□ 1.2
C9orf16-203ENST00000489240 PDE6BP35913 854 aa22.56■■□□□ 1.2
C9orf16-203ENST00000489240 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
C9orf16-203ENST00000489240 FBXO3Q9UK99 471 aa22.56■■□□□ 1.2
C9orf16-203ENST00000489240 PA2G4Q9UQ80 394 aaKnown RBP22.56■■□□□ 1.2
C9orf16-203ENST00000489240 OS9Q13438 667 aaPredicted RBP22.55■■□□□ 1.2
C9orf16-203ENST00000489240 C3orf67Q6ZVT6 689 aa22.55■■□□□ 1.2
C9orf16-203ENST00000489240 ERC1Q8IUD2 1116 aa22.55■■□□□ 1.2
C9orf16-203ENST00000489240 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
C9orf16-203ENST00000489240 LRP5O75197 1615 aa22.54■■□□□ 1.2
C9orf16-203ENST00000489240 KLHDC4Q8TBB5 520 aa22.54■■□□□ 1.2
C9orf16-203ENST00000489240 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
C9orf16-203ENST00000489240 COL11A2P13942 1736 aaPredicted RBP22.54■■□□□ 1.2
C9orf16-203ENST00000489240 KLRG2A4D1S0 409 aaPredicted RBP22.53■■□□□ 1.2
C9orf16-203ENST00000489240 CIAO1O76071 339 aa22.53■■□□□ 1.2
C9orf16-203ENST00000489240 CRY2Q49AN0 593 aa22.53■■□□□ 1.2
C9orf16-203ENST00000489240 ANKRD45Q5TZF3 282 aa22.53■■□□□ 1.2
C9orf16-203ENST00000489240 DDX46Q7L014 1031 aaKnown RBP22.53■■□□□ 1.2
C9orf16-203ENST00000489240 RPGRQ92834 1020 aaKnown RBP22.53■■□□□ 1.2
C9orf16-203ENST00000489240 ZNF594Q96JF6 807 aaPredicted RBP22.53■■□□□ 1.2
C9orf16-203ENST00000489240 SIL1Q9H173 461 aa22.53■■□□□ 1.2
C9orf16-203ENST00000489240 IGHMBP2P38935 993 aaKnown RBP22.52■■□□□ 1.2
C9orf16-203ENST00000489240 NUCB1Q02818 461 aa22.52■■□□□ 1.2
C9orf16-203ENST00000489240 KIF1BPQ96EK5 621 aa22.52■■□□□ 1.2
C9orf16-203ENST00000489240 LRRCC1Q9C099 1032 aa22.52■■□□□ 1.2
C9orf16-203ENST00000489240 SEC31BQ9NQW1 1179 aa22.52■■□□□ 1.2
C9orf16-203ENST00000489240 PDZRN3Q9UPQ7 1066 aa22.52■■□□□ 1.2
C9orf16-203ENST00000489240 DLEC1Q9Y238 1755 aa22.52■■□□□ 1.2
C9orf16-203ENST00000489240 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
C9orf16-203ENST00000489240 EYA2O00167 538 aa22.51■■□□□ 1.19
C9orf16-203ENST00000489240 APBB1O00213 710 aa22.51■■□□□ 1.19
C9orf16-203ENST00000489240 LDHAL6AQ6ZMR3 332 aa22.51■■□□□ 1.19
C9orf16-203ENST00000489240 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
C9orf16-203ENST00000489240 RBM17Q96I25 401 aaKnown RBP22.51■■□□□ 1.19
C9orf16-203ENST00000489240 A0A1B0GUL6 1792 aa22.5■■□□□ 1.19
C9orf16-203ENST00000489240 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
C9orf16-203ENST00000489240 IL15P40933 162 aaPredicted RBP22.5■■□□□ 1.19
C9orf16-203ENST00000489240 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
C9orf16-203ENST00000489240 RHPN1Q8TCX5 695 aa22.5■■□□□ 1.19
C9orf16-203ENST00000489240 MPHOSPH8Q99549 860 aa22.5■■□□□ 1.19
C9orf16-203ENST00000489240 HOXA10P31260 410 aaPredicted RBP22.49■■□□□ 1.19
C9orf16-203ENST00000489240 CNNM1Q9NRU3 951 aa22.49■■□□□ 1.19
C9orf16-203ENST00000489240 NPR1P16066 1061 aa22.48■■□□□ 1.19
C9orf16-203ENST00000489240 RPS8P62241 208 aaKnown RBP22.48■■□□□ 1.19
C9orf16-203ENST00000489240 ATG9AQ7Z3C6 839 aa22.48■■□□□ 1.19
C9orf16-203ENST00000489240 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
C9orf16-203ENST00000489240 PUS3Q9BZE2 481 aaKnown RBP22.48■■□□□ 1.19
C9orf16-203ENST00000489240 COL4A1P02462 1669 aa22.47■■□□□ 1.19
C9orf16-203ENST00000489240 SRGNP10124 158 aa22.47■■□□□ 1.19
C9orf16-203ENST00000489240 GRAPQ13588 217 aa22.47■■□□□ 1.19
C9orf16-203ENST00000489240 LRRC24Q50LG9 513 aa22.47■■□□□ 1.19
C9orf16-203ENST00000489240 GRAPLQ8TC17 118 aaPredicted RBP22.47■■□□□ 1.19
C9orf16-203ENST00000489240 H0YIN7 160 aa22.46■■□□□ 1.19
C9orf16-203ENST00000489240 SASH1O94885 1247 aa22.46■■□□□ 1.19
C9orf16-203ENST00000489240 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
C9orf16-203ENST00000489240 CELF1Q92879 486 aaKnown RBP22.46■■□□□ 1.19
C9orf16-203ENST00000489240 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
C9orf16-203ENST00000489240 LNPKQ9C0E8 428 aa22.46■■□□□ 1.19
C9orf16-203ENST00000489240 BSDC1Q9NW68 430 aaPredicted RBP22.46■■□□□ 1.19
C9orf16-203ENST00000489240 RIPOR2Q9Y4F9 1068 aa22.46■■□□□ 1.19
C9orf16-203ENST00000489240 SOCS7O14512 581 aa22.45■■□□□ 1.18
C9orf16-203ENST00000489240 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
C9orf16-203ENST00000489240 ALDH1B1P30837 517 aa22.45■■□□□ 1.18
C9orf16-203ENST00000489240 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
C9orf16-203ENST00000489240 MASTLQ96GX5 879 aa22.45■■□□□ 1.18
C9orf16-203ENST00000489240 SPON1Q9HCB6 807 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms