RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 SHANK3Q9BYB0 1731 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 UBE2HP62256 183 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 TFCP2Q12800 502 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 BLOC1S2Q6QNY1 142 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 GADD45BO75293 160 aaPredicted RBP23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 LETM1O95202 739 aaPredicted RBP23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 USPL1Q5W0Q7 1092 aa23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 ZCRB1Q8TBF4 217 aaKnown RBP23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 ANO8Q9HCE9 1232 aaPredicted RBP23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 KRT32Q14532 448 aa23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 ME3Q16798 604 aa23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 LARP6Q9BRS8 491 aaKnown RBP23.4■■□□□ 1.34
SYNGR1-207ENST00000489206 H7C1W4 665 aa23.39■■□□□ 1.33
SYNGR1-207ENST00000489206 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
SYNGR1-207ENST00000489206 GDPD2Q9HCC8 539 aa23.39■■□□□ 1.33
SYNGR1-207ENST00000489206 MTMR6Q9Y217 621 aa23.39■■□□□ 1.33
SYNGR1-207ENST00000489206 CNPY2Q9Y2B0 182 aa23.39■■□□□ 1.33
SYNGR1-207ENST00000489206 COL5A2P05997 1499 aaPredicted RBP23.39■■□□□ 1.33
SYNGR1-207ENST00000489206 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 TAF5LO75529 589 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 RPS6KB1P23443 525 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 NKX1-1Q15270 411 aaPredicted RBP23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 CCDC183Q5T5S1 534 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 SPEF2Q9C093 1822 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 ST3GAL1Q11201 340 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 HAUS7Q99871 368 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 GPR108Q9NPR9 543 aa23.38■■□□□ 1.33
SYNGR1-207ENST00000489206 PDCP20941 246 aa23.37■■□□□ 1.33
SYNGR1-207ENST00000489206 BRINP3Q76B58 766 aa23.37■■□□□ 1.33
SYNGR1-207ENST00000489206 FAM184AQ8NB25 1140 aa23.37■■□□□ 1.33
SYNGR1-207ENST00000489206 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.37■■□□□ 1.33
SYNGR1-207ENST00000489206 TPCN1Q9ULQ1 816 aa23.37■■□□□ 1.33
SYNGR1-207ENST00000489206 NBPF26B4DH59 902 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 NBPF14Q5TI25 921 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 NBPF10Q6P3W6 841 aaKnown RBP23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 ZNF589Q86UQ0 364 aaPredicted RBP23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 NBPF15Q8N660 670 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 PRDM11Q9NQV5 511 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 CWC25Q9NXE8 425 aaPredicted RBP23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 TNS2Q63HR2 1409 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 FOXO4P98177 505 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 LMBR1LQ6UX01 489 aa23.36■■□□□ 1.33
SYNGR1-207ENST00000489206 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
SYNGR1-207ENST00000489206 JARID2Q92833 1246 aaPredicted RBP23.35■■□□□ 1.33
SYNGR1-207ENST00000489206 U3KPZ7 1027 aaPredicted RBP23.35■■□□□ 1.33
SYNGR1-207ENST00000489206 PALLDQ8WX93 1383 aa23.35■■□□□ 1.33
SYNGR1-207ENST00000489206 MSNP26038 577 aaKnown RBP23.34■■□□□ 1.33
SYNGR1-207ENST00000489206 DBNDD2Q9BQY9 259 aa23.34■■□□□ 1.33
SYNGR1-207ENST00000489206 ZNF609O15014 1411 aa23.34■■□□□ 1.33
SYNGR1-207ENST00000489206 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
SYNGR1-207ENST00000489206 CCDC191Q8NCU4 936 aa23.34■■□□□ 1.33
SYNGR1-207ENST00000489206 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.33
SYNGR1-207ENST00000489206 UVSSAQ2YD98 709 aa23.33■■□□□ 1.33
SYNGR1-207ENST00000489206 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 CARD10Q9BWT7 1032 aa23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 NOL7Q9UMY1 257 aaKnown RBP23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 TOM1O60784 492 aa23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 IL15P40933 162 aaPredicted RBP23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 KBTBD3Q8NAB2 608 aa23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 EDC3Q96F86 508 aaKnown RBP23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 ATG3Q9NT62 314 aa23.32■■□□□ 1.32
SYNGR1-207ENST00000489206 LAMA4Q16363 1823 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 IL2RBP14784 551 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 TOB2Q14106 344 aaPredicted RBP23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 NECAB1Q8N987 351 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 VPS37CA5D8V6 355 aaPredicted RBP23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 FIBPO43427 364 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 MCM5P33992 734 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 TTLL7Q6ZT98 887 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 DDX54Q8TDD1 881 aaKnown RBP23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 DNAJC2Q99543 621 aaKnown RBP23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 CCDC39Q9UFE4 941 aa23.31■■□□□ 1.32
SYNGR1-207ENST00000489206 TOGARAM1Q9Y4F4 1720 aa23.3■■□□□ 1.32
SYNGR1-207ENST00000489206 ATG9AQ7Z3C6 839 aa23.3■■□□□ 1.32
SYNGR1-207ENST00000489206 NAP1L5Q96NT1 182 aaPredicted RBP23.3■■□□□ 1.32
SYNGR1-207ENST00000489206 CIAO1O76071 339 aa23.29■■□□□ 1.32
SYNGR1-207ENST00000489206 DNM1Q05193 864 aaKnown RBP23.29■■□□□ 1.32
SYNGR1-207ENST00000489206 NEK1Q96PY6 1258 aa23.29■■□□□ 1.32
SYNGR1-207ENST00000489206 HELLSQ9NRZ9 838 aa23.29■■□□□ 1.32
SYNGR1-207ENST00000489206 CHMP3Q9Y3E7 222 aa23.29■■□□□ 1.32
SYNGR1-207ENST00000489206 ELP1O95163 1332 aa23.28■■□□□ 1.32
SYNGR1-207ENST00000489206 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
SYNGR1-207ENST00000489206 RNF214Q8ND24 703 aa23.28■■□□□ 1.32
SYNGR1-207ENST00000489206 KRT85P78386 507 aa23.27■■□□□ 1.32
SYNGR1-207ENST00000489206 TAF6LQ9Y6J9 622 aa23.27■■□□□ 1.32
SYNGR1-207ENST00000489206 EYA2O00167 538 aa23.27■■□□□ 1.32
SYNGR1-207ENST00000489206 A1BGP04217 495 aa23.27■■□□□ 1.32
SYNGR1-207ENST00000489206 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.27■■□□□ 1.32
SYNGR1-207ENST00000489206 HMGB1P09429 215 aaKnown RBP23.26■■□□□ 1.31
SYNGR1-207ENST00000489206 DDX46Q7L014 1031 aaKnown RBP23.26■■□□□ 1.31
SYNGR1-207ENST00000489206 PAG1Q9NWQ8 432 aa23.26■■□□□ 1.31
SYNGR1-207ENST00000489206 SLAIN2Q9P270 581 aa23.26■■□□□ 1.31
SYNGR1-207ENST00000489206 ZNF500O60304 480 aaPredicted RBP23.25■■□□□ 1.31
SYNGR1-207ENST00000489206 FBXO3Q9UK99 471 aa23.25■■□□□ 1.31
SYNGR1-207ENST00000489206 ZKSCAN5Q9Y2L8 839 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms