RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 SDSP20132 328 aa8.12□□□□□ -1.11
HDLBP-243ENST00000488923 PDE1AP54750 535 aa8.12□□□□□ -1.11
HDLBP-243ENST00000488923 EN1Q05925 392 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-243ENST00000488923 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
HDLBP-243ENST00000488923 C9orf78Q9NZ63 289 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-243ENST00000488923 MEGF6O75095 1541 aa8.12□□□□□ -1.11
HDLBP-243ENST00000488923 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
HDLBP-243ENST00000488923 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-243ENST00000488923 ADCY9O60503 1353 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 UTYO14607 1347 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 SMAPO00193 183 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 ERC2O15083 957 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 IL2RBP14784 551 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 MX1P20591 662 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 MCCP23508 829 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 RABEP1Q15276 862 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 TOM1L2Q6ZVM7 507 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 ZCRB1Q8TBF4 217 aaKnown RBP8.11□□□□□ -1.11
HDLBP-243ENST00000488923 DDX17Q92841 729 aaKnown RBP8.11□□□□□ -1.11
HDLBP-243ENST00000488923 GPATCH3Q96I76 525 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 CHMP5Q9NZZ3 219 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 MAP3K2Q9Y2U5 619 aa8.11□□□□□ -1.11
HDLBP-243ENST00000488923 PARP4Q9UKK3 1724 aaKnown RBP8.11□□□□□ -1.11
HDLBP-243ENST00000488923 SIPA1L3O60292 1781 aaPredicted RBP8.1□□□□□ -1.11
HDLBP-243ENST00000488923 RGPD2P0DJD1 1756 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 STRCQ7RTU9 1775 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 SALL3Q9BXA9 1300 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 ZNF335Q9H4Z2 1342 aaPredicted RBP8.1□□□□□ -1.11
HDLBP-243ENST00000488923 PNMA6EA0A0J9YXQ4 647 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 GRM8O00222 908 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 SRGAP3O43295 1099 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 KCNQ3O43525 872 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 SURF6O75683 361 aaKnown RBP8.1□□□□□ -1.11
HDLBP-243ENST00000488923 PTMSP20962 102 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 SLC4A3P48751 1232 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 EVA1CP58658 441 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 PPP1R42Q7Z4L9 355 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 ZNF516Q92618 1163 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 COL5A2P05997 1499 aaPredicted RBP8.1□□□□□ -1.11
HDLBP-243ENST00000488923 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 COL15A1P39059 1388 aa8.1□□□□□ -1.11
HDLBP-243ENST00000488923 TTC41PQ6P2S7 1318 aa8.09□□□□□ -1.11
HDLBP-243ENST00000488923 USP42Q9H9J4 1324 aaKnown RBP8.09□□□□□ -1.11
HDLBP-243ENST00000488923 CYP27B1O15528 508 aa8.09□□□□□ -1.11
HDLBP-243ENST00000488923 MCM2P49736 904 aa8.09□□□□□ -1.11
HDLBP-243ENST00000488923 C16orf71Q8IYS4 520 aaPredicted RBP8.09□□□□□ -1.11
HDLBP-243ENST00000488923 CLASRPQ8N2M8 674 aaKnown RBP8.09□□□□□ -1.11
HDLBP-243ENST00000488923 RHPN1Q8TCX5 695 aa8.09□□□□□ -1.11
HDLBP-243ENST00000488923 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
HDLBP-243ENST00000488923 TEX13AQ9BXU3 409 aaPredicted RBP8.09□□□□□ -1.11
HDLBP-243ENST00000488923 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 NHSL1Q5SYE7 1610 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 K7ELQ4 463 aaPredicted RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 APBB1O00213 710 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 MAP3K7O43318 606 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 SMARCA5O60264 1052 aaPredicted RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 GLRX3O76003 335 aaKnown RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 HSP90AA1P07900 732 aaKnown RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 ANAPC15P60006 121 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 OS9Q13438 667 aaPredicted RBP8.08□□□□□ -1.12
HDLBP-243ENST00000488923 CNTROBQ8N137 903 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 ANTXR1Q9H6X2 564 aa8.08□□□□□ -1.12
HDLBP-243ENST00000488923 HIP1O00291 1037 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 DGAT1O75907 488 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 PDIA6Q15084 440 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 PLBD2Q8NHP8 589 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 RUFY2Q8WXA3 655 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 ZNF496Q96IT1 587 aaPredicted RBP8.07□□□□□ -1.12
HDLBP-243ENST00000488923 CDCA7Q9BWT1 371 aaPredicted RBP8.07□□□□□ -1.12
HDLBP-243ENST00000488923 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
HDLBP-243ENST00000488923 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 NEURL1BA8MQ27 555 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 APLP1P51693 650 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 G3BP1Q13283 466 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDLBP-243ENST00000488923 SLC39A6Q13433 755 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 COPS6Q7L5N1 327 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 TICAM2Q86XR7 235 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 NKX2-3Q8TAU0 364 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 OTUD7AQ8TE49 926 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-243ENST00000488923 XAGE3Q8WTP9 111 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 ESYT1Q9BSJ8 1104 aa8.06□□□□□ -1.12
HDLBP-243ENST00000488923 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-243ENST00000488923 ANXA1P04083 346 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 IFIT2P09913 472 aaKnown RBP8.05□□□□□ -1.12
HDLBP-243ENST00000488923 CHMLP26374 656 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 DEKP35659 375 aaKnown RBP8.05□□□□□ -1.12
HDLBP-243ENST00000488923 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
HDLBP-243ENST00000488923 AIMP1Q12904 312 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms