RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GRIN2CQ14957 1233 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 ETFBKMTQ8IXQ9 262 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 CMTR1Q8N1G2 835 aaKnown RBP7.9□□□□□ -1.14
ITGB1-214ENST00000488427 TUT1Q9H6E5 874 aaKnown RBP7.9□□□□□ -1.14
ITGB1-214ENST00000488427 EGFRP00533 1210 aa7.89□□□□□ -1.15
ITGB1-214ENST00000488427 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-214ENST00000488427 NDUFB5O43674 189 aa7.88□□□□□ -1.15
ITGB1-214ENST00000488427 XYLBO75191 536 aa7.88□□□□□ -1.15
ITGB1-214ENST00000488427 MPSTP25325 297 aa7.88□□□□□ -1.15
ITGB1-214ENST00000488427 MZF1P28698 734 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-214ENST00000488427 EIF1AXP47813 144 aaKnown RBP7.88□□□□□ -1.15
ITGB1-214ENST00000488427 SYT9Q86SS6 491 aa7.88□□□□□ -1.15
ITGB1-214ENST00000488427 BHMTQ93088 406 aa7.88□□□□□ -1.15
ITGB1-214ENST00000488427 UBAP1LF5GYI3 381 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 OPLAHO14841 1288 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 MAP3K6O95382 1288 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 FURINP09958 794 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 SERPINB4P48594 390 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 ZNF211Q13398 564 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-214ENST00000488427 PDE12Q6L8Q7 609 aaKnown RBP7.87□□□□□ -1.15
ITGB1-214ENST00000488427 STRN4Q9NRL3 753 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 GGA1Q9UJY5 639 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 BRPF3Q9ULD4 1205 aa7.87□□□□□ -1.15
ITGB1-214ENST00000488427 NEURL1BA8MQ27 555 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 GNB5O14775 395 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 NEFLP07196 543 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 RARAP10276 462 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 LINC00114Q6XXX2 140 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 GSX2Q9BZM3 304 aa7.86□□□□□ -1.15
ITGB1-214ENST00000488427 ELOA3CA0A087WX78 387 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-214ENST00000488427 ELOA3DA6NLF2 546 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-214ENST00000488427 C2CD2LO14523 706 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 PSAPP07602 524 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 NFKB1P19838 968 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 DNM1Q05193 864 aaKnown RBP7.85□□□□□ -1.15
ITGB1-214ENST00000488427 ELOA3BQ3SY89 546 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 TTC39BQ5VTQ0 682 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-214ENST00000488427 NLRP13Q86W25 1043 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 AEBP1Q8IUX7 1158 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 ELOA3Q8NG57 546 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 EDEM1Q92611 657 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 TNFRSF25Q93038 417 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 SLC30A3Q99726 388 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 SUV39H2Q9H5I1 410 aa7.85□□□□□ -1.15
ITGB1-214ENST00000488427 BIN2Q9UBW5 565 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-214ENST00000488427 SOWAHDA6NJG2 315 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 ADARB2-AS1A8MUL3 147 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 SCNN1AP37088 669 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 PCBP4P57723 403 aaKnown RBP7.84□□□□□ -1.15
ITGB1-214ENST00000488427 MTMR3Q13615 1198 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 UBE2OQ9C0C9 1292 aaKnown RBP7.84□□□□□ -1.15
ITGB1-214ENST00000488427 RBSNQ9H1K0 784 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 ANO2Q9NQ90 1003 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 NOP53Q9NZM5 478 aaKnown RBP7.84□□□□□ -1.15
ITGB1-214ENST00000488427 IVNS1ABPQ9Y6Y0 642 aa7.84□□□□□ -1.15
ITGB1-214ENST00000488427 EPXP11678 715 aa7.83□□□□□ -1.16
ITGB1-214ENST00000488427 HOXB4P17483 251 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-214ENST00000488427 ZNF438Q7Z4V0 828 aa7.83□□□□□ -1.16
ITGB1-214ENST00000488427 Q8N3U1 123 aa7.83□□□□□ -1.16
ITGB1-214ENST00000488427 PMEPA1Q969W9 287 aa7.83□□□□□ -1.16
ITGB1-214ENST00000488427 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
ITGB1-214ENST00000488427 BTBD6Q96KE9 485 aa7.83□□□□□ -1.16
ITGB1-214ENST00000488427 C1QTNF9BB2RNN3 333 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 ZBTB39O15060 712 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 PDGFAP04085 211 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 SOX18P35713 384 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 ADH7P40394 386 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 PLAURQ03405 335 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 TBC1D8BQ0IIM8 1120 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 C8orf34Q49A92 452 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 KCNMB2Q9Y691 235 aa7.82□□□□□ -1.16
ITGB1-214ENST00000488427 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
ITGB1-214ENST00000488427 SASH3O75995 380 aa7.81□□□□□ -1.16
ITGB1-214ENST00000488427 DGKGP49619 791 aa7.81□□□□□ -1.16
ITGB1-214ENST00000488427 NRLP54845 237 aa7.81□□□□□ -1.16
ITGB1-214ENST00000488427 DHX32Q7L7V1 743 aaKnown RBP7.81□□□□□ -1.16
ITGB1-214ENST00000488427 KRT25Q7Z3Z0 450 aa7.81□□□□□ -1.16
ITGB1-214ENST00000488427 RAB44Q7Z6P3 723 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-214ENST00000488427 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-214ENST00000488427 TLR7Q9NYK1 1049 aaKnown RBP7.81□□□□□ -1.16
ITGB1-214ENST00000488427 GPLD1P80108 840 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 XKR5Q6UX68 686 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 CD163Q86VB7 1156 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 ATCAYQ86WG3 371 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 TMC1Q8TDI8 760 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 SPACA7Q96KW9 195 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 IGFLR1Q9H665 355 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 POLIQ9UNA4 740 aa7.8□□□□□ -1.16
ITGB1-214ENST00000488427 TARSP26639 723 aaKnown RBP7.79□□□□□ -1.16
ITGB1-214ENST00000488427 FCHSD1Q86WN1 690 aa7.79□□□□□ -1.16
ITGB1-214ENST00000488427 ZSCAN29Q8IWY8 852 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-214ENST00000488427 SNX29Q8TEQ0 813 aa7.79□□□□□ -1.16
ITGB1-214ENST00000488427 DMRTB1Q96MA1 342 aa7.79□□□□□ -1.16
ITGB1-214ENST00000488427 ELP3Q9H9T3 547 aa7.79□□□□□ -1.16
ITGB1-214ENST00000488427 DNAJB12Q9NXW2 375 aaKnown RBP7.79□□□□□ -1.16
ITGB1-214ENST00000488427 USP20Q9Y2K6 914 aa7.79□□□□□ -1.16
ITGB1-214ENST00000488427 SPDYE3A6NKU9 549 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms