RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 DCAF11Q8TEB1 546 aa9.23□□□□□ -0.93
TNFSF4-203ENST00000488053 SBNO1A3KN83 1393 aa9.23□□□□□ -0.93
TNFSF4-203ENST00000488053 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 ADGRB2O60241 1585 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 SCTRP47872 440 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 NCOA4Q13772 614 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 VPS72Q15906 364 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 Q6ZVU0 165 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 MEIOBQ8N635 442 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 ACIN1Q9UKV3 1341 aaKnown RBP9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 ARHGEF10O15013 1369 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 ANKARQ7Z5J8 1434 aa9.22□□□□□ -0.93
TNFSF4-203ENST00000488053 FAM83GA6ND36 823 aa9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 ADH1AP07327 375 aa9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 CYP2U1Q7Z449 544 aa9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 DEFB132Q7Z7B7 95 aa9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 NRAPQ86VF7 1730 aa9.21□□□□□ -0.94
TNFSF4-203ENST00000488053 ALS2Q96Q42 1657 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 ARHGEF28Q8N1W1 1705 aaKnown RBP9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 UPP2O95045 317 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 CBLBQ13191 982 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 TRIM50Q86XT4 487 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 NGDNQ8NEJ9 315 aaKnown RBP9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 AAASQ9NRG9 546 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 BTG4Q9NY30 223 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 GPRASP1Q5JY77 1395 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 BLMP54132 1417 aaPredicted RBP9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 TULP4Q9NRJ4 1543 aa9.2□□□□□ -0.94
TNFSF4-203ENST00000488053 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
TNFSF4-203ENST00000488053 ADD1P35611 737 aaKnown RBP9.19□□□□□ -0.94
TNFSF4-203ENST00000488053 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
TNFSF4-203ENST00000488053 KRT27Q7Z3Y8 459 aa9.19□□□□□ -0.94
TNFSF4-203ENST00000488053 TSEN34Q9BSV6 310 aaKnown RBP9.19□□□□□ -0.94
TNFSF4-203ENST00000488053 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
TNFSF4-203ENST00000488053 ATP5J2-PTCD1G3V325 749 aa9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 COL14A1Q05707 1796 aaKnown RBP9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 EIF3AQ14152 1382 aaKnown RBP9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 ITSN1Q15811 1721 aa9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 FAM182BQ5T319 152 aa9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
TNFSF4-203ENST00000488053 ATP1A2P50993 1020 aa9.17□□□□□ -0.94
TNFSF4-203ENST00000488053 SCARF1Q14162 830 aa9.17□□□□□ -0.94
TNFSF4-203ENST00000488053 NUTM2GQ5VZR2 741 aa9.17□□□□□ -0.94
TNFSF4-203ENST00000488053 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
TNFSF4-203ENST00000488053 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
TNFSF4-203ENST00000488053 ATP7BP35670 1465 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 GNRH1P01148 92 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 PTGIRP43119 386 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 GTF2IP78347 998 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 NUDT16Q96DE0 195 aaKnown RBP9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 PRDM11Q9NQV5 511 aa9.16□□□□□ -0.94
TNFSF4-203ENST00000488053 RFX1P22670 979 aa9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 RELBQ01201 579 aa9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 CHRNA2Q15822 529 aa9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
TNFSF4-203ENST00000488053 KIAA0232Q92628 1395 aa9.14□□□□□ -0.95
TNFSF4-203ENST00000488053 BMP1P13497 986 aa9.14□□□□□ -0.95
TNFSF4-203ENST00000488053 ZC3H6P61129 1189 aaKnown RBP9.14□□□□□ -0.95
TNFSF4-203ENST00000488053 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
TNFSF4-203ENST00000488053 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
TNFSF4-203ENST00000488053 TOPAZ1Q8N9V7 1692 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 SPATA31A5Q5VU36 1347 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 SPATA31A7Q8IWB4 1347 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 BMP2P12643 396 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 RASA1P20936 1047 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 BAG6P46379 1132 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 TRIM46Q7Z4K8 759 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 ARID3AQ99856 593 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 RGPD1P0DJD0 1748 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 THSD7AQ9UPZ6 1657 aa9.13□□□□□ -0.95
TNFSF4-203ENST00000488053 ACEP12821 1306 aa9.12□□□□□ -0.95
TNFSF4-203ENST00000488053 KIAA1210Q9ULL0 1709 aa9.12□□□□□ -0.95
TNFSF4-203ENST00000488053 SPINT1O43278 529 aa9.12□□□□□ -0.95
TNFSF4-203ENST00000488053 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
TNFSF4-203ENST00000488053 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
TNFSF4-203ENST00000488053 LARGE2Q8N3Y3 721 aa9.12□□□□□ -0.95
TNFSF4-203ENST00000488053 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 CLDN10P78369 228 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 CLN3Q13286 438 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 NBPF8Q3BBV2 869 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 ABTB2Q8N961 1025 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 PURBQ96QR8 312 aaKnown RBP9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 ZNF395Q9H8N7 513 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms