RNA–Protein interactions for RNA: ENST00000487897.5

PRKCD-206, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-206ENST00000487897 LAMB2P55268 1798 aa21.59■■□□□ 1.05
PRKCD-206ENST00000487897 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.05
PRKCD-206ENST00000487897 PDE8AO60658 829 aa21.58■■□□□ 1.05
PRKCD-206ENST00000487897 SLC51AQ86UW1 340 aa21.58■■□□□ 1.05
PRKCD-206ENST00000487897 RRAGCQ9HB90 399 aa21.58■■□□□ 1.05
PRKCD-206ENST00000487897 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
PRKCD-206ENST00000487897 CDHR2Q9BYE9 1310 aa21.57■■□□□ 1.04
PRKCD-206ENST00000487897 TRMT2AQ8IZ69 625 aaKnown RBP21.57■■□□□ 1.04
PRKCD-206ENST00000487897 LINS1Q8NG48 757 aa21.57■■□□□ 1.04
PRKCD-206ENST00000487897 GCKRQ14397 625 aa21.56■■□□□ 1.04
PRKCD-206ENST00000487897 CELF1Q92879 486 aaKnown RBP21.56■■□□□ 1.04
PRKCD-206ENST00000487897 TIAM2Q8IVF5 1701 aa21.55■■□□□ 1.04
PRKCD-206ENST00000487897 DICER1Q9UPY3 1922 aaKnown RBP21.55■■□□□ 1.04
PRKCD-206ENST00000487897 H7C1W4 665 aa21.55■■□□□ 1.04
PRKCD-206ENST00000487897 TOMM70O94826 608 aa21.55■■□□□ 1.04
PRKCD-206ENST00000487897 CCDC152Q4G0S7 254 aa21.55■■□□□ 1.04
PRKCD-206ENST00000487897 F6X3S4 739 aa21.54■■□□□ 1.04
PRKCD-206ENST00000487897 VEGFAP15692 232 aaPredicted RBP21.54■■□□□ 1.04
PRKCD-206ENST00000487897 RPS8P62241 208 aaKnown RBP21.54■■□□□ 1.04
PRKCD-206ENST00000487897 MPNDQ8N594 471 aa21.54■■□□□ 1.04
PRKCD-206ENST00000487897 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
PRKCD-206ENST00000487897 RTFDC1Q9BY42 306 aaPredicted RBP21.54■■□□□ 1.04
PRKCD-206ENST00000487897 FZD9O00144 591 aa21.53■■□□□ 1.04
PRKCD-206ENST00000487897 DPP8Q6V1X1 898 aaPredicted RBP21.53■■□□□ 1.04
PRKCD-206ENST00000487897 UBE3BQ7Z3V4 1068 aa21.53■■□□□ 1.04
PRKCD-206ENST00000487897 C16orf71Q8IYS4 520 aaPredicted RBP21.53■■□□□ 1.04
PRKCD-206ENST00000487897 SUPT20HQ8NEM7 779 aa21.53■■□□□ 1.04
PRKCD-206ENST00000487897 VPS33BQ9H267 617 aa21.53■■□□□ 1.04
PRKCD-206ENST00000487897 DDNO94850 711 aaPredicted RBP21.52■■□□□ 1.04
PRKCD-206ENST00000487897 BEND3Q5T5X7 828 aa21.52■■□□□ 1.04
PRKCD-206ENST00000487897 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
PRKCD-206ENST00000487897 SEC31BQ9NQW1 1179 aa21.52■■□□□ 1.04
PRKCD-206ENST00000487897 CTSWP56202 376 aa21.51■■□□□ 1.03
PRKCD-206ENST00000487897 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
PRKCD-206ENST00000487897 TTLL11Q8NHH1 800 aa21.51■■□□□ 1.03
PRKCD-206ENST00000487897 POTECB2RU33 542 aa21.5■■□□□ 1.03
PRKCD-206ENST00000487897 PPIP5K2O43314 1243 aa21.5■■□□□ 1.03
PRKCD-206ENST00000487897 RBM46Q8TBY0 533 aaKnown RBP21.5■■□□□ 1.03
PRKCD-206ENST00000487897 SSH1Q8WYL5 1049 aa21.5■■□□□ 1.03
PRKCD-206ENST00000487897 CCDC85AQ96PX6 553 aaPredicted RBP21.5■■□□□ 1.03
PRKCD-206ENST00000487897 CT47B1P0C2W7 299 aaPredicted RBP21.49■■□□□ 1.03
PRKCD-206ENST00000487897 CASP7P55210 303 aa21.49■■□□□ 1.03
PRKCD-206ENST00000487897 PLA2G12BQ9BX93 195 aa21.49■■□□□ 1.03
PRKCD-206ENST00000487897 NSFL1CQ9UNZ2 370 aaKnown RBP21.49■■□□□ 1.03
PRKCD-206ENST00000487897 TAF1P21675 1872 aa21.49■■□□□ 1.03
PRKCD-206ENST00000487897 ZNF541Q9H0D2 1346 aa21.49■■□□□ 1.03
PRKCD-206ENST00000487897 AOC3Q16853 763 aa21.48■■□□□ 1.03
PRKCD-206ENST00000487897 ALDH1L2Q3SY69 923 aa21.48■■□□□ 1.03
PRKCD-206ENST00000487897 NIM1KQ8IY84 436 aa21.48■■□□□ 1.03
PRKCD-206ENST00000487897 L3MBTL3Q96JM7 780 aaPredicted RBP21.48■■□□□ 1.03
PRKCD-206ENST00000487897 WDR90Q96KV7 1748 aa21.47■■□□□ 1.03
PRKCD-206ENST00000487897 EIF6P56537 245 aaKnown RBP21.47■■□□□ 1.03
PRKCD-206ENST00000487897 KIAA2012Q0VF49 1180 aa21.47■■□□□ 1.03
PRKCD-206ENST00000487897 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
PRKCD-206ENST00000487897 ANKRD18AQ8IVF6 992 aa21.47■■□□□ 1.03
PRKCD-206ENST00000487897 CDC5LQ99459 802 aaKnown RBP21.47■■□□□ 1.03
PRKCD-206ENST00000487897 PTPRCP08575 1304 aa21.47■■□□□ 1.03
PRKCD-206ENST00000487897 RTL9Q8NET4 1388 aa21.47■■□□□ 1.03
PRKCD-206ENST00000487897 ALDH1L1O75891 902 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 GPSM2P81274 684 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 GPC2Q8N158 579 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 SRCIN1Q9C0H9 1055 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 GREM2Q9H772 168 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 COL4A1P02462 1669 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 COL4A5P29400 1685 aa21.46■■□□□ 1.03
PRKCD-206ENST00000487897 IQCA1LA6NCM1 817 aa21.45■■□□□ 1.02
PRKCD-206ENST00000487897 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
PRKCD-206ENST00000487897 LRRC37AA6NMS7 1700 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 GRM8O00222 908 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 CSF1RP07333 972 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 FSTL1Q12841 308 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 PODXL2Q9NZ53 605 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 POLLQ9UGP5 575 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 ZNRF3Q9ULT6 936 aa21.44■■□□□ 1.02
PRKCD-206ENST00000487897 C6orf229H3BNL8 230 aa21.43■■□□□ 1.02
PRKCD-206ENST00000487897 HSPA6P17066 643 aa21.43■■□□□ 1.02
PRKCD-206ENST00000487897 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
PRKCD-206ENST00000487897 WASHC4Q2M389 1173 aa21.43■■□□□ 1.02
PRKCD-206ENST00000487897 SMC1BQ8NDV3 1235 aa21.43■■□□□ 1.02
PRKCD-206ENST00000487897 SMC4Q9NTJ3 1288 aa21.43■■□□□ 1.02
PRKCD-206ENST00000487897 C9orf78Q9NZ63 289 aaPredicted RBP21.43■■□□□ 1.02
PRKCD-206ENST00000487897 TBC1D16Q8TBP0 767 aa21.42■■□□□ 1.02
PRKCD-206ENST00000487897 EYA3Q99504 573 aa21.42■■□□□ 1.02
PRKCD-206ENST00000487897 BSDC1Q9NW68 430 aaPredicted RBP21.42■■□□□ 1.02
PRKCD-206ENST00000487897 ANKIB1Q9P2G1 1089 aa21.42■■□□□ 1.02
PRKCD-206ENST00000487897 GJA3Q9Y6H8 435 aa21.42■■□□□ 1.02
PRKCD-206ENST00000487897 DUOX1Q9NRD9 1551 aa21.41■■□□□ 1.02
PRKCD-206ENST00000487897 ITGA6P23229 1130 aa21.41■■□□□ 1.02
PRKCD-206ENST00000487897 FOXO4P98177 505 aa21.41■■□□□ 1.02
PRKCD-206ENST00000487897 HACL1Q9UJ83 578 aa21.41■■□□□ 1.02
PRKCD-206ENST00000487897 CXCL9Q07325 125 aa21.4■■□□□ 1.02
PRKCD-206ENST00000487897 FAM161AQ3B820 660 aa21.4■■□□□ 1.02
PRKCD-206ENST00000487897 TAF1DQ9H5J8 278 aaPredicted RBP21.4■■□□□ 1.02
PRKCD-206ENST00000487897 GGA1Q9UJY5 639 aa21.4■■□□□ 1.02
PRKCD-206ENST00000487897 XDHP47989 1333 aa21.39■■□□□ 1.01
PRKCD-206ENST00000487897 RIMBP2O15034 1052 aa21.39■■□□□ 1.01
PRKCD-206ENST00000487897 IGHMBP2P38935 993 aaKnown RBP21.39■■□□□ 1.01
PRKCD-206ENST00000487897 BRPF1P55201 1214 aaPredicted RBP21.39■■□□□ 1.01
PRKCD-206ENST00000487897 MYH3P11055 1940 aa21.38■■□□□ 1.01
PRKCD-206ENST00000487897 UFL1O94874 794 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms