RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 NWD2Q9ULI1 1742 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 USP54Q70EL1 1684 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 ST20-MTHFSA0A0A6YYL1 179 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 IRF5Q13568 498 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 ILDR2Q71H61 639 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 ARHGEF10O15013 1369 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 CD163L1Q9NR16 1453 aa9.08□□□□□ -0.96
SEC22C-215ENST00000487701 USP6P35125 1406 aa9.07□□□□□ -0.96
SEC22C-215ENST00000487701 EIF4G2P78344 907 aaKnown RBP eCLIP9.07□□□□□ -0.96
SEC22C-215ENST00000487701 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
SEC22C-215ENST00000487701 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
SEC22C-215ENST00000487701 ATAD2Q6PL18 1390 aa9.07□□□□□ -0.96
SEC22C-215ENST00000487701 SSH2Q76I76 1423 aa9.06□□□□□ -0.96
SEC22C-215ENST00000487701 ADAMTS2O95450 1211 aa9.06□□□□□ -0.96
SEC22C-215ENST00000487701 MEX3CQ5U5Q3 659 aaKnown RBP9.06□□□□□ -0.96
SEC22C-215ENST00000487701 CPSF1Q10570 1443 aaKnown RBP9.05□□□□□ -0.96
SEC22C-215ENST00000487701 COL14A1Q05707 1796 aaKnown RBP9.05□□□□□ -0.96
SEC22C-215ENST00000487701 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 LILRA1O75019 489 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 ADH1AP07327 375 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 POTEAQ6S8J7 498 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 C8orf37Q96NL8 207 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 ZNF395Q9H8N7 513 aaPredicted RBP9.05□□□□□ -0.96
SEC22C-215ENST00000487701 PCDHB11Q9Y5F2 797 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 AFF2P51816 1311 aa9.05□□□□□ -0.96
SEC22C-215ENST00000487701 KIF20BQ96Q89 1820 aa9.04□□□□□ -0.96
SEC22C-215ENST00000487701 TTLL8A6PVC2 850 aa9.04□□□□□ -0.96
SEC22C-215ENST00000487701 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
SEC22C-215ENST00000487701 POLMQ9NP87 494 aaPredicted RBP9.04□□□□□ -0.96
SEC22C-215ENST00000487701 COG6Q9Y2V7 657 aa9.04□□□□□ -0.96
SEC22C-215ENST00000487701 SLIT2O94813 1529 aa9.04□□□□□ -0.96
SEC22C-215ENST00000487701 LTN1O94822 1766 aa9.04□□□□□ -0.96
SEC22C-215ENST00000487701 H3BM21 787 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 SPINT1O43278 529 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
SEC22C-215ENST00000487701 VEGFBP49765 207 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 FLIIQ13045 1269 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
SEC22C-215ENST00000487701 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 SLIT3O75094 1523 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 COL18A1P39060 1754 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 LMO7Q8WWI1 1683 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 BRWD3Q6RI45 1802 aa9.03□□□□□ -0.96
SEC22C-215ENST00000487701 BCL9LQ86UU0 1499 aa9.02□□□□□ -0.96
SEC22C-215ENST00000487701 A0A1W2PP64 1363 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 BRD4O60885 1362 aaPredicted RBP9.02□□□□□ -0.97
SEC22C-215ENST00000487701 FIGNL2A6NMB9 653 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 RAD21O60216 631 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 GMPRP36959 345 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 WASHC4Q2M389 1173 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 CC2D2BQ6DHV5 1058 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 WWC1Q8IX03 1113 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 IRF7Q92985 503 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
SEC22C-215ENST00000487701 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 USP19O94966 1318 aa9.02□□□□□ -0.97
SEC22C-215ENST00000487701 KTN1Q86UP2 1357 aaKnown RBP9.01□□□□□ -0.97
SEC22C-215ENST00000487701 ATRNO75882 1429 aa9.01□□□□□ -0.97
SEC22C-215ENST00000487701 GLI3P10071 1580 aa9.01□□□□□ -0.97
SEC22C-215ENST00000487701 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
SEC22C-215ENST00000487701 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.97
SEC22C-215ENST00000487701 ZNF772Q68DY9 489 aaPredicted RBP9.01□□□□□ -0.97
SEC22C-215ENST00000487701 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
SEC22C-215ENST00000487701 POM121Q96HA1 1249 aa9.01□□□□□ -0.97
SEC22C-215ENST00000487701 NGLY1Q96IV0 654 aa9.01□□□□□ -0.97
SEC22C-215ENST00000487701 SLC12A5Q9H2X9 1139 aa9.01□□□□□ -0.97
SEC22C-215ENST00000487701 TTC21BQ7Z4L5 1316 aa9.01□□□□□ -0.97
SEC22C-215ENST00000487701 NFAT5O94916 1531 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 NINLQ9Y2I6 1382 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 PTGIRP43119 386 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
SEC22C-215ENST00000487701 ERVK-9P63128 1117 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 TMF1P82094 1093 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 SLFNL1Q499Z3 407 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 ABTB2Q8N961 1025 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 TMC1Q8TDI8 760 aa9□□□□□ -0.97
SEC22C-215ENST00000487701 EDC4Q6P2E9 1401 aaKnown RBP8.99□□□□□ -0.97
SEC22C-215ENST00000487701 WNK3Q9BYP7 1800 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 FAM83GA6ND36 823 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 SCTRP47872 440 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 SEMA3FQ13275 785 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 RNF135Q8IUD6 432 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 ANKRD26Q9UPS8 1709 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
SEC22C-215ENST00000487701 CDK12Q9NYV4 1490 aaPredicted RBP8.98□□□□□ -0.97
SEC22C-215ENST00000487701 USP21Q9UK80 565 aa8.98□□□□□ -0.97
SEC22C-215ENST00000487701 TTC21AQ8NDW8 1320 aa8.98□□□□□ -0.97
SEC22C-215ENST00000487701 CAMTA1Q9Y6Y1 1673 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 RGS12O14924 1447 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms