RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CHRDL2Q6WN34 429 aa8.07□□□□□ -1.12
COL4A3-206ENST00000487633 TPTE2Q6XPS3 522 aa8.07□□□□□ -1.12
COL4A3-206ENST00000487633 BCL2L13Q9BXK5 485 aa8.07□□□□□ -1.12
COL4A3-206ENST00000487633 LAMB4A4D0S4 1761 aa8.07□□□□□ -1.12
COL4A3-206ENST00000487633 HOXA10P31260 410 aaPredicted RBP8.06□□□□□ -1.12
COL4A3-206ENST00000487633 TTC5Q8N0Z6 440 aa8.06□□□□□ -1.12
COL4A3-206ENST00000487633 C2orf69Q8N8R5 385 aa8.06□□□□□ -1.12
COL4A3-206ENST00000487633 CDCA5Q96FF9 252 aa8.06□□□□□ -1.12
COL4A3-206ENST00000487633 PSMD14O00487 310 aa8.05□□□□□ -1.12
COL4A3-206ENST00000487633 SUSD4Q5VX71 490 aa8.05□□□□□ -1.12
COL4A3-206ENST00000487633 CLEC4GQ6UXB4 293 aa8.05□□□□□ -1.12
COL4A3-206ENST00000487633 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
COL4A3-206ENST00000487633 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
COL4A3-206ENST00000487633 RTL9Q8NET4 1388 aa8.05□□□□□ -1.12
COL4A3-206ENST00000487633 EYSQ5T1H1 3165 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 UBE2Q2LH0YL09 131 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 GPTP24298 496 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 CC2D2BQ6DHV5 1058 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 OTOP1Q7RTM1 612 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 ZNF428Q96B54 188 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 RTFDC1Q9BY42 306 aaPredicted RBP8.04□□□□□ -1.12
COL4A3-206ENST00000487633 GGA3Q9NZ52 723 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 FZD1Q9UP38 647 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 TRIM17Q9Y577 477 aa8.04□□□□□ -1.12
COL4A3-206ENST00000487633 ABCC4O15439 1325 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 ANKRD36CQ5JPF3 1778 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 FKTNO75072 461 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 MYCP01106 439 aaPredicted RBP8.03□□□□□ -1.12
COL4A3-206ENST00000487633 TM4SF4P48230 202 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 KIAA2012Q0VF49 1180 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 TTLL7Q6ZT98 887 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 NGEFQ8N5V2 710 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 CRAMP1Q96RY5 1269 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 PRO3102Q9H379 93 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 DBNDD1Q9H9R9 158 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 ATP6V0A2Q9Y487 856 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
COL4A3-206ENST00000487633 LRRC37AA6NMS7 1700 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 KIF7Q2M1P5 1343 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
COL4A3-206ENST00000487633 WTIPA6NIX2 430 aaPredicted RBP8.02□□□□□ -1.13
COL4A3-206ENST00000487633 H7C1D1 291 aa8.02□□□□□ -1.13
COL4A3-206ENST00000487633 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
COL4A3-206ENST00000487633 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
COL4A3-206ENST00000487633 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.13
COL4A3-206ENST00000487633 LAMB1P07942 1786 aa8.02□□□□□ -1.13
COL4A3-206ENST00000487633 CDHR2Q9BYE9 1310 aa8.02□□□□□ -1.13
COL4A3-206ENST00000487633 ALPK3Q96L96 1907 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 PSME4Q14997 1843 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 NTSR2O95665 410 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
COL4A3-206ENST00000487633 CD99L2Q8TCZ2 262 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 DCPSQ96C86 337 aaKnown RBP8.01□□□□□ -1.13
COL4A3-206ENST00000487633 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 TEX13AQ9BXU3 409 aaPredicted RBP8.01□□□□□ -1.13
COL4A3-206ENST00000487633 RAPGEFL1Q9UHV5 662 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 PTPN22Q9Y2R2 807 aa8.01□□□□□ -1.13
COL4A3-206ENST00000487633 CEMIPQ8WUJ3 1361 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 RIMBP2O15034 1052 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 MNX1P50219 401 aaPredicted RBP8□□□□□ -1.13
COL4A3-206ENST00000487633 TNIP1Q15025 636 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 DOK7Q18PE1 504 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 DPP8Q6V1X1 898 aaPredicted RBP8□□□□□ -1.13
COL4A3-206ENST00000487633 Q7L0L9 218 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 ARMC5Q96C12 935 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 RBM17Q96I25 401 aaKnown RBP8□□□□□ -1.13
COL4A3-206ENST00000487633 PANK3Q9H999 370 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 ZNF652Q9Y2D9 606 aa8□□□□□ -1.13
COL4A3-206ENST00000487633 DDX60Q8IY21 1712 aaKnown RBP8□□□□□ -1.13
COL4A3-206ENST00000487633 BTBD11A6QL63 1104 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 IGF2BP3O00425 579 aaKnown RBP eCLIP7.99□□□□□ -1.13
COL4A3-206ENST00000487633 ZNF609O15014 1411 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 SLC24A1O60721 1099 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 TEFQ10587 303 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 SCARF1Q14162 830 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 NOM1Q5C9Z4 860 aaKnown RBP7.99□□□□□ -1.13
COL4A3-206ENST00000487633 MPNDQ8N594 471 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 DPF2Q92785 391 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 SHISA4Q96DD7 197 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 ZNF333Q96JL9 665 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 PHACTR3Q96KR7 559 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 CFHR5Q9BXR6 569 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 ZBTB3Q9H5J0 574 aa7.99□□□□□ -1.13
COL4A3-206ENST00000487633 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.99□□□□□ -1.13
COL4A3-206ENST00000487633 PTPN12Q05209 780 aaKnown RBP7.98□□□□□ -1.13
COL4A3-206ENST00000487633 PRKG1Q13976 671 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 DCTN1Q14203 1278 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 MORC1Q86VD1 984 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 SULF1Q8IWU6 871 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 SP8Q8IXZ3 490 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 ZNF34Q8IZ26 560 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 MIS18AQ9NYP9 233 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 POLLQ9UGP5 575 aa7.98□□□□□ -1.13
COL4A3-206ENST00000487633 COL3A1P02461 1466 aaPredicted RBP7.98□□□□□ -1.13
COL4A3-206ENST00000487633 MUC3AQ02505 3323 aa7.97□□□□□ -1.13
COL4A3-206ENST00000487633 GNAT3A8MTJ3 354 aa7.97□□□□□ -1.13
COL4A3-206ENST00000487633 HCLS1P14317 486 aaPredicted RBP7.97□□□□□ -1.13
COL4A3-206ENST00000487633 INTS3Q68E01 1043 aaKnown RBP7.97□□□□□ -1.13
COL4A3-206ENST00000487633 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms