RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 PTPRCP08575 1304 aa13.59□□□□□ -0.23
TOP3B-216ENST00000487485 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
TOP3B-216ENST00000487485 HSPA8P11142 646 aaKnown RBP13.58□□□□□ -0.24
TOP3B-216ENST00000487485 NPR1P16066 1061 aa13.58□□□□□ -0.24
TOP3B-216ENST00000487485 FKBP4Q02790 459 aaKnown RBP eCLIP13.58□□□□□ -0.24
TOP3B-216ENST00000487485 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-216ENST00000487485 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-216ENST00000487485 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
TOP3B-216ENST00000487485 MYD88Q99836 296 aa13.58□□□□□ -0.24
TOP3B-216ENST00000487485 KLRG2A4D1S0 409 aaPredicted RBP13.57□□□□□ -0.24
TOP3B-216ENST00000487485 RASSF10A6NK89 507 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 F6X3S4 739 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 SLC34A2O95436 690 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 NEXNQ0ZGT2 675 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 ISCA1Q9BUE6 129 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 UBN2Q6ZU65 1347 aa13.57□□□□□ -0.24
TOP3B-216ENST00000487485 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
TOP3B-216ENST00000487485 SUSD4Q5VX71 490 aa13.56□□□□□ -0.24
TOP3B-216ENST00000487485 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
TOP3B-216ENST00000487485 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
TOP3B-216ENST00000487485 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
TOP3B-216ENST00000487485 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
TOP3B-216ENST00000487485 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
TOP3B-216ENST00000487485 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
TOP3B-216ENST00000487485 FZD9O00144 591 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
TOP3B-216ENST00000487485 TRIM28Q13263 835 aaKnown RBP13.55□□□□□ -0.24
TOP3B-216ENST00000487485 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 SLC4A10Q6U841 1118 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 TPTE2Q6XPS3 522 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 PNMA8AQ86V59 439 aaPredicted RBP13.55□□□□□ -0.24
TOP3B-216ENST00000487485 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 ARHGAP45Q92619 1136 aa13.55□□□□□ -0.24
TOP3B-216ENST00000487485 ABT1Q9ULW3 272 aaKnown RBP13.55□□□□□ -0.24
TOP3B-216ENST00000487485 IGKV5-2P06315 115 aa13.54□□□□□ -0.24
TOP3B-216ENST00000487485 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-216ENST00000487485 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
TOP3B-216ENST00000487485 MAP2K1Q02750 393 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-216ENST00000487485 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
TOP3B-216ENST00000487485 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
TOP3B-216ENST00000487485 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
TOP3B-216ENST00000487485 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
TOP3B-216ENST00000487485 NYXQ9GZU5 481 aa13.54□□□□□ -0.24
TOP3B-216ENST00000487485 ADAMTSL1Q8N6G6 1762 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 NTSR2O95665 410 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 ZKSCAN2Q63HK3 967 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 NUTM1Q86Y26 1132 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
TOP3B-216ENST00000487485 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
TOP3B-216ENST00000487485 CWC25Q9NXE8 425 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-216ENST00000487485 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
TOP3B-216ENST00000487485 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.25
TOP3B-216ENST00000487485 GPC2Q8N158 579 aa13.52□□□□□ -0.25
TOP3B-216ENST00000487485 IBTKQ9P2D0 1353 aaPredicted RBP13.52□□□□□ -0.25
TOP3B-216ENST00000487485 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 TRIM27P14373 513 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 ALDH1B1P30837 517 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 GCKRQ14397 625 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 SRCIN1Q9C0H9 1055 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
TOP3B-216ENST00000487485 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 EPS15P42566 896 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
TOP3B-216ENST00000487485 CYP4F22Q6NT55 531 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
TOP3B-216ENST00000487485 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
TOP3B-216ENST00000487485 PDE4DIPQ5VU43 2346 aa13.5□□□□□ -0.25
TOP3B-216ENST00000487485 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 TRAF5O00463 557 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 PLIN1O60240 522 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 PCCAP05165 728 aaPredicted RBP13.49□□□□□ -0.25
TOP3B-216ENST00000487485 CCT4P50991 539 aaKnown RBP13.49□□□□□ -0.25
TOP3B-216ENST00000487485 EIF6P56537 245 aaKnown RBP13.49□□□□□ -0.25
TOP3B-216ENST00000487485 GRM1Q13255 1194 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 SLC10A5Q5PT55 438 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 CST9Q5W186 159 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 PAXIP1Q6ZW49 1069 aaPredicted RBP13.49□□□□□ -0.25
TOP3B-216ENST00000487485 SLC51AQ86UW1 340 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
TOP3B-216ENST00000487485 PSMD1Q99460 953 aa13.49□□□□□ -0.25
TOP3B-216ENST00000487485 SNED1Q8TER0 1413 aa13.48□□□□□ -0.25
TOP3B-216ENST00000487485 LAMB2P55268 1798 aa13.48□□□□□ -0.25
TOP3B-216ENST00000487485 ABCC4O15439 1325 aa13.48□□□□□ -0.25
TOP3B-216ENST00000487485 COL4A5P29400 1685 aa13.48□□□□□ -0.25
TOP3B-216ENST00000487485 H7C1W4 665 aa13.48□□□□□ -0.25
TOP3B-216ENST00000487485 DZIP1LQ8IYY4 767 aaKnown RBP13.48□□□□□ -0.25
TOP3B-216ENST00000487485 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.48□□□□□ -0.25
TOP3B-216ENST00000487485 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms