RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 CASZ1Q86V15 1759 aa21.04■□□□□ 0.96
NF1-211ENST00000487476 POLA2Q14181 598 aa21.03■□□□□ 0.96
NF1-211ENST00000487476 SSH3Q8TE77 659 aa21.03■□□□□ 0.96
NF1-211ENST00000487476 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
NF1-211ENST00000487476 RWDD1Q9H446 243 aaPredicted RBP21.03■□□□□ 0.96
NF1-211ENST00000487476 PA2G4Q9UQ80 394 aaKnown RBP21.03■□□□□ 0.96
NF1-211ENST00000487476 ST5P78524 1137 aa21.02■□□□□ 0.96
NF1-211ENST00000487476 DDX60Q8IY21 1712 aaKnown RBP21.02■□□□□ 0.96
NF1-211ENST00000487476 RFX5P48382 616 aaPredicted RBP21.01■□□□□ 0.95
NF1-211ENST00000487476 ZNF594Q96JF6 807 aaPredicted RBP21.01■□□□□ 0.95
NF1-211ENST00000487476 NLRP3Q96P20 1036 aa21.01■□□□□ 0.95
NF1-211ENST00000487476 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
NF1-211ENST00000487476 SEC31BQ9NQW1 1179 aa21■□□□□ 0.95
NF1-211ENST00000487476 SOCS7O14512 581 aa20.99■□□□□ 0.95
NF1-211ENST00000487476 HMMRO75330 724 aa20.99■□□□□ 0.95
NF1-211ENST00000487476 ITGA6P23229 1130 aa20.99■□□□□ 0.95
NF1-211ENST00000487476 HSP90B1P14625 803 aaKnown RBP20.99■□□□□ 0.95
NF1-211ENST00000487476 SF3B3Q15393 1217 aaKnown RBP20.99■□□□□ 0.95
NF1-211ENST00000487476 EXOC6BQ9Y2D4 811 aa20.99■□□□□ 0.95
NF1-211ENST00000487476 TNRC6CQ9HCJ0 1690 aaKnown RBP20.98■□□□□ 0.95
NF1-211ENST00000487476 PTPN12Q05209 780 aaKnown RBP20.98■□□□□ 0.95
NF1-211ENST00000487476 CCDC152Q4G0S7 254 aa20.98■□□□□ 0.95
NF1-211ENST00000487476 CCDC57Q2TAC2 916 aa20.98■□□□□ 0.95
NF1-211ENST00000487476 SIL1Q9H173 461 aa20.98■□□□□ 0.95
NF1-211ENST00000487476 DCTPP1Q9H773 170 aa20.98■□□□□ 0.95
NF1-211ENST00000487476 NRXN2Q9P2S2 1712 aa20.98■□□□□ 0.95
NF1-211ENST00000487476 APBB1O00213 710 aa20.97■□□□□ 0.95
NF1-211ENST00000487476 IFIT5Q13325 482 aaKnown RBP20.97■□□□□ 0.95
NF1-211ENST00000487476 BRIP1Q9BX63 1249 aa20.97■□□□□ 0.95
NF1-211ENST00000487476 SURF6O75683 361 aaKnown RBP20.97■□□□□ 0.95
NF1-211ENST00000487476 SGIP1Q9BQI5 828 aa20.97■□□□□ 0.95
NF1-211ENST00000487476 GOLGB1Q14789 3259 aaKnown RBP20.97■□□□□ 0.95
NF1-211ENST00000487476 PTGER2P43116 358 aa20.96■□□□□ 0.95
NF1-211ENST00000487476 COL4A1P02462 1669 aa20.95■□□□□ 0.94
NF1-211ENST00000487476 LAMB2P55268 1798 aa20.95■□□□□ 0.94
NF1-211ENST00000487476 PUS3Q9BZE2 481 aaKnown RBP20.95■□□□□ 0.94
NF1-211ENST00000487476 ANKRD18BA2A2Z9 1011 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 KLRG2A4D1S0 409 aaPredicted RBP20.94■□□□□ 0.94
NF1-211ENST00000487476 POLD1P28340 1107 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 CRY2Q49AN0 593 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 CENPQQ7L2Z9 268 aaPredicted RBP20.94■□□□□ 0.94
NF1-211ENST00000487476 SMC5Q8IY18 1101 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 COPRSQ9NQ92 184 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 RIC1Q4ADV7 1423 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 BCL11AQ9H165 835 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 MYH3P11055 1940 aa20.94■□□□□ 0.94
NF1-211ENST00000487476 LRRC24Q50LG9 513 aa20.93■□□□□ 0.94
NF1-211ENST00000487476 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
NF1-211ENST00000487476 NOP58Q9Y2X3 529 aaKnown RBP20.93■□□□□ 0.94
NF1-211ENST00000487476 TAF7LQ5H9L4 462 aa20.93■□□□□ 0.94
NF1-211ENST00000487476 CELF1Q92879 486 aaKnown RBP20.93■□□□□ 0.94
NF1-211ENST00000487476 RTL9Q8NET4 1388 aa20.92■□□□□ 0.94
NF1-211ENST00000487476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.92■□□□□ 0.94
NF1-211ENST00000487476 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
NF1-211ENST00000487476 SLC51AQ86UW1 340 aa20.92■□□□□ 0.94
NF1-211ENST00000487476 RPGRQ92834 1020 aaKnown RBP20.92■□□□□ 0.94
NF1-211ENST00000487476 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
NF1-211ENST00000487476 SMARCA5O60264 1052 aaPredicted RBP20.91■□□□□ 0.94
NF1-211ENST00000487476 CHRNA5P30532 468 aa20.91■□□□□ 0.94
NF1-211ENST00000487476 PDE6BP35913 854 aa20.91■□□□□ 0.94
NF1-211ENST00000487476 DDX46Q7L014 1031 aaKnown RBP20.91■□□□□ 0.94
NF1-211ENST00000487476 ATG9AQ7Z3C6 839 aa20.91■□□□□ 0.94
NF1-211ENST00000487476 SRGNP10124 158 aa20.9■□□□□ 0.94
NF1-211ENST00000487476 G3BP1Q13283 466 aaKnown RBP eCLIP20.9■□□□□ 0.94
NF1-211ENST00000487476 OS9Q13438 667 aaPredicted RBP20.9■□□□□ 0.94
NF1-211ENST00000487476 ANKRD45Q5TZF3 282 aa20.9■□□□□ 0.94
NF1-211ENST00000487476 LDHAL6AQ6ZMR3 332 aa20.9■□□□□ 0.94
NF1-211ENST00000487476 TAF1P21675 1872 aa20.9■□□□□ 0.94
NF1-211ENST00000487476 C10orf71Q711Q0 1435 aa20.9■□□□□ 0.94
NF1-211ENST00000487476 SASH1O94885 1247 aa20.89■□□□□ 0.94
NF1-211ENST00000487476 C2CD5Q86YS7 1000 aa20.89■□□□□ 0.94
NF1-211ENST00000487476 EYA2O00167 538 aa20.89■□□□□ 0.93
NF1-211ENST00000487476 SPON1Q9HCB6 807 aa20.89■□□□□ 0.93
NF1-211ENST00000487476 PPP1R1BQ9UD71 204 aaPredicted RBP20.89■□□□□ 0.93
NF1-211ENST00000487476 HOXA10P31260 410 aaPredicted RBP20.88■□□□□ 0.93
NF1-211ENST00000487476 CDC5LQ99459 802 aaKnown RBP20.88■□□□□ 0.93
NF1-211ENST00000487476 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
NF1-211ENST00000487476 RIPOR2Q9Y4F9 1068 aa20.88■□□□□ 0.93
NF1-211ENST00000487476 RPS8P62241 208 aaKnown RBP20.88■□□□□ 0.93
NF1-211ENST00000487476 ANKRD18AQ8IVF6 992 aa20.88■□□□□ 0.93
NF1-211ENST00000487476 RBM17Q96I25 401 aaKnown RBP20.88■□□□□ 0.93
NF1-211ENST00000487476 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
NF1-211ENST00000487476 NUCB1Q02818 461 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 RHPN1Q8TCX5 695 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 MPHOSPH8Q99549 860 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 IL1RAPL2Q9NP60 686 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 CNNM1Q9NRU3 951 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 H0YIN7 160 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 TFCP2Q12800 502 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 GRAPQ13588 217 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 GRAPLQ8TC17 118 aaPredicted RBP20.87■□□□□ 0.93
NF1-211ENST00000487476 ZNF622Q969S3 477 aaKnown RBP eCLIP20.87■□□□□ 0.93
NF1-211ENST00000487476 LNPKQ9C0E8 428 aa20.87■□□□□ 0.93
NF1-211ENST00000487476 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
NF1-211ENST00000487476 RAB11FIP3O75154 756 aa20.86■□□□□ 0.93
NF1-211ENST00000487476 NPR1P16066 1061 aa20.86■□□□□ 0.93
NF1-211ENST00000487476 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
NF1-211ENST00000487476 LRRCC1Q9C099 1032 aa20.86■□□□□ 0.93
NF1-211ENST00000487476 CIAO1O76071 339 aa20.85■□□□□ 0.93
NF1-211ENST00000487476 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms