RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 FHDC1Q9C0D6 1143 aaPredicted RBP8.75□□□□□ -1.01
SOX2-OT-210ENST00000487240 C5P01031 1676 aa8.75□□□□□ -1.01
SOX2-OT-210ENST00000487240 MTHFSP49914 203 aa8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 PLEKHO1Q53GL0 409 aaPredicted RBP8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 SULT6B1Q6IMI4 303 aa8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 ZNF530Q6P9A1 599 aaPredicted RBP8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 QSER1Q2KHR3 1735 aa8.74□□□□□ -1.01
SOX2-OT-210ENST00000487240 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 POLD1P28340 1107 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 IL13P35225 146 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 CTDSPL2Q05D32 466 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 SMIM5Q71RC9 77 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 COL23A1Q86Y22 540 aaPredicted RBP8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 SCUBE3Q8IX30 993 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 SLC16A10Q8TF71 515 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 POM121Q96HA1 1249 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 SYT17Q9BSW7 474 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 ASAP1Q9ULH1 1129 aa8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
SOX2-OT-210ENST00000487240 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 HMOX1P09601 288 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 SIK1P57059 783 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 AMOTQ4VCS5 1084 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 PRM3Q9NNZ6 103 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 ATG3Q9NT62 314 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
SOX2-OT-210ENST00000487240 C4BP0C0L5 1744 aa8.71□□□□□ -1.01
SOX2-OT-210ENST00000487240 HSP90AB1P08238 724 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 PTPN5P54829 565 aa8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 CABP4P57796 275 aa8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 COPS2P61201 443 aa8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 AMIGO3Q86WK7 504 aa8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 LINC00116Q8NCU8 138 aa8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 DCAF5Q96JK2 942 aa8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-210ENST00000487240 ERVV-2B6SEH9 535 aa8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 DIAPH1O60610 1272 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 YY1P25490 414 aa8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 ITPK1Q13572 414 aa8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 KDRP35968 1356 aa8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 PLEKHG2Q9H7P9 1386 aa8.7□□□□□ -1.02
SOX2-OT-210ENST00000487240 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
SOX2-OT-210ENST00000487240 TRAK2O60296 914 aa8.69□□□□□ -1.02
SOX2-OT-210ENST00000487240 DESI1Q6ICB0 168 aa8.69□□□□□ -1.02
SOX2-OT-210ENST00000487240 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
SOX2-OT-210ENST00000487240 LRRN4Q8WUT4 740 aa8.69□□□□□ -1.02
SOX2-OT-210ENST00000487240 HMX1Q9NP08 348 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-210ENST00000487240 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 NFATC2IPQ8NCF5 419 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 NLGN2Q8NFZ4 835 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 MAP3K5Q99683 1374 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 COL24A1Q17RW2 1714 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 UBR3Q6ZT12 1888 aa8.68□□□□□ -1.02
SOX2-OT-210ENST00000487240 GPR162Q16538 588 aa8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 AKAP4Q5JQC9 854 aa8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 LGR6Q9HBX8 967 aa8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 NDUFB9Q9Y6M9 179 aa8.67□□□□□ -1.02
SOX2-OT-210ENST00000487240 COL3A1P02461 1466 aaPredicted RBP8.66□□□□□ -1.02
SOX2-OT-210ENST00000487240 SSFA2P28290 1259 aa8.66□□□□□ -1.02
SOX2-OT-210ENST00000487240 ABL2P42684 1182 aa8.66□□□□□ -1.02
SOX2-OT-210ENST00000487240 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
SOX2-OT-210ENST00000487240 SPSB2Q99619 263 aa8.66□□□□□ -1.02
SOX2-OT-210ENST00000487240 MTRQ99707 1265 aa8.66□□□□□ -1.02
SOX2-OT-210ENST00000487240 UTRNP46939 3433 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 ZPR1O75312 459 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 JUNDP17535 347 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 MSS51Q4VC12 460 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 LYPD8Q6UX82 237 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 SLC52A2Q9HAB3 445 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 SCN11AQ9UI33 1791 aa8.65□□□□□ -1.02
SOX2-OT-210ENST00000487240 TLL1O43897 1013 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 PPP2R1AP30153 589 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 SLC39A6Q13433 755 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 PCDH10Q9P2E7 1040 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 WWC3Q9ULE0 1092 aa8.64□□□□□ -1.03
SOX2-OT-210ENST00000487240 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
SOX2-OT-210ENST00000487240 CNTNAP4Q9C0A0 1308 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms