RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
SMARCAL1-212ENST00000486983 IL16Q14005 1332 aa9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 ADH1AP07327 375 aa9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 ANP32AP39687 249 aaKnown RBP9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 PDE4DQ08499 809 aa9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 C20orf194Q5TEA3 1177 aa9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 AATKQ6ZMQ8 1374 aa9.11□□□□□ -0.95
SMARCAL1-212ENST00000486983 CDK12Q9NYV4 1490 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-212ENST00000486983 SAFB2Q14151 953 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMARCAL1-212ENST00000486983 FBXO41Q8TF61 875 aa9.1□□□□□ -0.95
SMARCAL1-212ENST00000486983 MON2Q7Z3U7 1717 aa9.1□□□□□ -0.95
SMARCAL1-212ENST00000486983 METP08581 1390 aa9.1□□□□□ -0.95
SMARCAL1-212ENST00000486983 PLEKHG1Q9ULL1 1385 aa9.1□□□□□ -0.95
SMARCAL1-212ENST00000486983 LMTK3Q96Q04 1460 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 DIP2AQ14689 1571 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 U2AF1L5P0DN76 240 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 TNNT2P45379 298 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 PLA2G4EQ3MJ16 856 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 XP32Q5T750 250 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 ADAM32Q8TC27 787 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 PLEKHF1Q96S99 279 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 BACH2Q9BYV9 841 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 SLIT1O75093 1534 aa9.09□□□□□ -0.95
SMARCAL1-212ENST00000486983 ARHGAP23Q9P227 1491 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 PPIP5K1Q6PFW1 1433 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 ADAMTS13Q76LX8 1427 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 TOPAZ1Q8N9V7 1692 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 LILRA1O75019 489 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 ITGB2P05107 769 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 NR6A1Q15406 480 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 CABP1Q9NZU7 370 aa9.08□□□□□ -0.96
SMARCAL1-212ENST00000486983 NRKQ7Z2Y5 1582 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 MAPK8IP3Q9UPT6 1336 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 C3P01024 1663 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 LRRC7Q96NW7 1537 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 DIAPH1O60610 1272 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 BCAR3O75815 825 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 RAB15P59190 212 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 NBPF20Q3BBV1 942 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 LYSMD3Q7Z3D4 306 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 IPO9Q96P70 1041 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 NOP58Q9Y2X3 529 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
SMARCAL1-212ENST00000486983 CNTNAP5Q8WYK1 1306 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 MSTNO14793 375 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 ADAM23O75077 832 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 TMPOP42166 694 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 PTGIRP43119 386 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 PTK2Q05397 1052 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 ZNF837Q96EG3 531 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 DCAF5Q96JK2 942 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
SMARCAL1-212ENST00000486983 ITSN1Q15811 1721 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 ERVH48-1M5A8F1 160 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 WAPLQ7Z5K2 1190 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 CLUAP1Q96AJ1 413 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 ENAMQ9NRM1 1142 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
SMARCAL1-212ENST00000486983 FER1L4A9Z1Z3 1794 aa9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 GPR25O00155 361 aa9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 RHOQP17081 205 aa9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 CANXP27824 592 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 POLKQ9UBT6 870 aa9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 RRP7AQ9Y3A4 280 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
SMARCAL1-212ENST00000486983 ROBO2Q9HCK4 1378 aa9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 U2SURPO15042 1029 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 PROCP04070 461 aa9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 CALD1Q05682 793 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 PRICKLE2Q7Z3G6 844 aa9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 NUDT16Q96DE0 195 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-212ENST00000486983 NALCNQ8IZF0 1738 aa9.02□□□□□ -0.96
SMARCAL1-212ENST00000486983 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
SMARCAL1-212ENST00000486983 TRIM22Q8IYM9 498 aa9.02□□□□□ -0.97
SMARCAL1-212ENST00000486983 OVOS2A0A0J9YW53 1432 aa9.02□□□□□ -0.97
SMARCAL1-212ENST00000486983 OVOS2Q6IE36 1432 aa9.02□□□□□ -0.97
SMARCAL1-212ENST00000486983 NEFMP07197 916 aa9.01□□□□□ -0.97
SMARCAL1-212ENST00000486983 BRPF1P55201 1214 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-212ENST00000486983 ZKSCAN2Q63HK3 967 aa9.01□□□□□ -0.97
SMARCAL1-212ENST00000486983 TXNDC2Q86VQ3 553 aa9.01□□□□□ -0.97
SMARCAL1-212ENST00000486983 DDRGK1Q96HY6 314 aa9.01□□□□□ -0.97
SMARCAL1-212ENST00000486983 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-212ENST00000486983 KIF16BQ96L93 1317 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms