RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 XAGE3Q8WTP9 111 aa26.27■■□□□ 1.8
PHF1-208ENST00000486845 AIMP1Q12904 312 aaKnown RBP26.26■■□□□ 1.79
PHF1-208ENST00000486845 GRM1Q13255 1194 aa26.26■■□□□ 1.79
PHF1-208ENST00000486845 CIAPIN1Q6FI81 312 aa26.26■■□□□ 1.79
PHF1-208ENST00000486845 TRMT112Q9UI30 125 aaKnown RBP26.26■■□□□ 1.79
PHF1-208ENST00000486845 SH3TC1Q8TE82 1336 aa26.25■■□□□ 1.79
PHF1-208ENST00000486845 TMPOP42166 694 aaKnown RBP26.25■■□□□ 1.79
PHF1-208ENST00000486845 TCIRG1Q13488 830 aa26.25■■□□□ 1.79
PHF1-208ENST00000486845 GRAPQ13588 217 aa26.25■■□□□ 1.79
PHF1-208ENST00000486845 TNIP1Q15025 636 aa26.25■■□□□ 1.79
PHF1-208ENST00000486845 GRAPLQ8TC17 118 aaPredicted RBP26.25■■□□□ 1.79
PHF1-208ENST00000486845 NECTIN2Q92692 538 aa26.25■■□□□ 1.79
PHF1-208ENST00000486845 ABHD8Q96I13 439 aa26.25■■□□□ 1.79
PHF1-208ENST00000486845 BCL2L13Q9BXK5 485 aa26.24■■□□□ 1.79
PHF1-208ENST00000486845 MAP2K2P36507 400 aa26.23■■□□□ 1.79
PHF1-208ENST00000486845 TMC4Q7Z404 712 aa26.23■■□□□ 1.79
PHF1-208ENST00000486845 RAD17O75943 681 aa26.22■■□□□ 1.79
PHF1-208ENST00000486845 CELF2O95319 508 aaKnown RBP26.22■■□□□ 1.79
PHF1-208ENST00000486845 RALBP1Q15311 655 aa26.22■■□□□ 1.79
PHF1-208ENST00000486845 ZC3H15Q8WU90 426 aaKnown RBP26.22■■□□□ 1.79
PHF1-208ENST00000486845 PGAP2Q9UHJ9 254 aa26.22■■□□□ 1.79
PHF1-208ENST00000486845 SAPCD2Q86UD0 394 aa26.21■■□□□ 1.79
PHF1-208ENST00000486845 GLIS2Q9BZE0 524 aaPredicted RBP26.21■■□□□ 1.79
PHF1-208ENST00000486845 HHIPL1Q96JK4 782 aa26.2■■□□□ 1.78
PHF1-208ENST00000486845 LRRC37AA6NMS7 1700 aa26.19■■□□□ 1.78
PHF1-208ENST00000486845 DUOX1Q9NRD9 1551 aa26.19■■□□□ 1.78
PHF1-208ENST00000486845 CHL1O00533 1208 aa26.18■■□□□ 1.78
PHF1-208ENST00000486845 AOC2O75106 756 aa26.18■■□□□ 1.78
PHF1-208ENST00000486845 TAF1P21675 1872 aa26.17■■□□□ 1.78
PHF1-208ENST00000486845 CA12O43570 354 aa26.17■■□□□ 1.78
PHF1-208ENST00000486845 HIRAP54198 1017 aaPredicted RBP26.17■■□□□ 1.78
PHF1-208ENST00000486845 CDC37L1Q7L3B6 337 aa26.17■■□□□ 1.78
PHF1-208ENST00000486845 TRPM4Q8TD43 1214 aa26.17■■□□□ 1.78
PHF1-208ENST00000486845 CHPF2Q9P2E5 772 aa26.17■■□□□ 1.78
PHF1-208ENST00000486845 CNOT7Q9UIV1 285 aaKnown RBP26.17■■□□□ 1.78
PHF1-208ENST00000486845 YDJCA8MPS7 323 aa26.16■■□□□ 1.78
PHF1-208ENST00000486845 H7C1D1 291 aa26.16■■□□□ 1.78
PHF1-208ENST00000486845 KRT24Q2M2I5 525 aa26.16■■□□□ 1.78
PHF1-208ENST00000486845 PLBD2Q8NHP8 589 aa26.16■■□□□ 1.78
PHF1-208ENST00000486845 DDX60Q8IY21 1712 aaKnown RBP26.16■■□□□ 1.78
PHF1-208ENST00000486845 NEUROD2Q15784 382 aa26.15■■□□□ 1.78
PHF1-208ENST00000486845 HDGFL1Q5TGJ6 251 aa26.15■■□□□ 1.78
PHF1-208ENST00000486845 ZNF408Q9H9D4 720 aa26.15■■□□□ 1.78
PHF1-208ENST00000486845 HOXB7P09629 217 aa26.14■■□□□ 1.78
PHF1-208ENST00000486845 CCDC146Q8IYE0 955 aa26.14■■□□□ 1.78
PHF1-208ENST00000486845 LAS1LQ9Y4W2 734 aaKnown RBP26.14■■□□□ 1.78
PHF1-208ENST00000486845 BRPF1P55201 1214 aaPredicted RBP26.13■■□□□ 1.77
PHF1-208ENST00000486845 WASHC4Q2M389 1173 aa26.13■■□□□ 1.77
PHF1-208ENST00000486845 ANKRD13DQ6ZTN6 518 aa26.13■■□□□ 1.77
PHF1-208ENST00000486845 MICALL2Q8IY33 904 aa26.13■■□□□ 1.77
PHF1-208ENST00000486845 DPF2Q92785 391 aa26.13■■□□□ 1.77
PHF1-208ENST00000486845 TSKSQ9UJT2 592 aa26.13■■□□□ 1.77
PHF1-208ENST00000486845 SF3B3Q15393 1217 aaKnown RBP26.12■■□□□ 1.77
PHF1-208ENST00000486845 ZNF428Q96B54 188 aa26.12■■□□□ 1.77
PHF1-208ENST00000486845 ISCA1Q9BUE6 129 aa26.12■■□□□ 1.77
PHF1-208ENST00000486845 DBF4Q9UBU7 674 aaPredicted RBP26.12■■□□□ 1.77
PHF1-208ENST00000486845 SHTN1A0MZ66 631 aa26.11■■□□□ 1.77
PHF1-208ENST00000486845 CELF1Q92879 486 aaKnown RBP26.11■■□□□ 1.77
PHF1-208ENST00000486845 FAM89AQ96GI7 184 aa26.11■■□□□ 1.77
PHF1-208ENST00000486845 NSFL1CQ9UNZ2 370 aaKnown RBP26.11■■□□□ 1.77
PHF1-208ENST00000486845 TRIM35Q9UPQ4 493 aa26.11■■□□□ 1.77
PHF1-208ENST00000486845 MYBBP1AQ9BQG0 1328 aaKnown RBP26.11■■□□□ 1.77
PHF1-208ENST00000486845 RUNDC1Q96C34 613 aa26.1■■□□□ 1.77
PHF1-208ENST00000486845 ZBTB12Q9Y330 459 aaPredicted RBP26.1■■□□□ 1.77
PHF1-208ENST00000486845 CCDC85CA6NKD9 419 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 ATP5J2-PTCD1G3V325 749 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 C6orf229H3BNL8 230 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 PSMD14O00487 310 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 USP48Q86UV5 1035 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 DBNDD1Q9H9R9 158 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 HYPKQ9NX55 129 aa26.09■■□□□ 1.77
PHF1-208ENST00000486845 RPS12P25398 132 aaKnown RBP26.08■■□□□ 1.77
PHF1-208ENST00000486845 NOGQ13253 232 aa26.08■■□□□ 1.77
PHF1-208ENST00000486845 WDR43Q15061 677 aaKnown RBP eCLIP26.08■■□□□ 1.77
PHF1-208ENST00000486845 FAM161AQ3B820 660 aa26.08■■□□□ 1.77
PHF1-208ENST00000486845 EYA3Q99504 573 aa26.08■■□□□ 1.77
PHF1-208ENST00000486845 RIMBP2O15034 1052 aa26.07■■□□□ 1.76
PHF1-208ENST00000486845 HUNKP57058 714 aa26.07■■□□□ 1.76
PHF1-208ENST00000486845 GPSM2P81274 684 aa26.07■■□□□ 1.76
PHF1-208ENST00000486845 TRIM28Q13263 835 aaKnown RBP26.06■■□□□ 1.76
PHF1-208ENST00000486845 SAMD7Q7Z3H4 446 aa26.06■■□□□ 1.76
PHF1-208ENST00000486845 POLLQ9UGP5 575 aa26.06■■□□□ 1.76
PHF1-208ENST00000486845 IRS4O14654 1257 aaPredicted RBP26.05■■□□□ 1.76
PHF1-208ENST00000486845 ECE2O60344 883 aa26.05■■□□□ 1.76
PHF1-208ENST00000486845 TBC1D10BQ4KMP7 808 aaPredicted RBP26.05■■□□□ 1.76
PHF1-208ENST00000486845 KRT26Q7Z3Y9 468 aa26.05■■□□□ 1.76
PHF1-208ENST00000486845 RPS8P62241 208 aaKnown RBP26.04■■□□□ 1.76
PHF1-208ENST00000486845 RTL5Q5HYW3 569 aaPredicted RBP26.04■■□□□ 1.76
PHF1-208ENST00000486845 DUSP27Q5VZP5 1158 aa26.04■■□□□ 1.76
PHF1-208ENST00000486845 CFAP44Q96MT7 982 aa26.04■■□□□ 1.76
PHF1-208ENST00000486845 COL4A1P02462 1669 aa26.03■■□□□ 1.76
PHF1-208ENST00000486845 HSP90B1P14625 803 aaKnown RBP26.03■■□□□ 1.76
PHF1-208ENST00000486845 DOK7Q18PE1 504 aa26.03■■□□□ 1.76
PHF1-208ENST00000486845 TBC1D16Q8TBP0 767 aa26.03■■□□□ 1.76
PHF1-208ENST00000486845 DCPSQ96C86 337 aaKnown RBP26.03■■□□□ 1.76
PHF1-208ENST00000486845 MCOLN1Q9GZU1 580 aa26.03■■□□□ 1.76
PHF1-208ENST00000486845 CASP8AP2Q9UKL3 1982 aa26.03■■□□□ 1.76
PHF1-208ENST00000486845 RTL9Q8NET4 1388 aa26.03■■□□□ 1.76
PHF1-208ENST00000486845 MLLT1Q03111 559 aaPredicted RBP26.02■■□□□ 1.76
PHF1-208ENST00000486845 GBA2Q9HCG7 927 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms