RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 ZNF784Q8NCA9 323 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF3-211ENST00000486829 NLRP3Q96P20 1036 aa14.34□□□□□ -0.11
ARHGEF3-211ENST00000486829 DDX60Q8IY21 1712 aaKnown RBP14.34□□□□□ -0.11
ARHGEF3-211ENST00000486829 MYH3P11055 1940 aa14.33□□□□□ -0.11
ARHGEF3-211ENST00000486829 CCDC24Q8N4L8 307 aa14.33□□□□□ -0.12
ARHGEF3-211ENST00000486829 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
ARHGEF3-211ENST00000486829 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
ARHGEF3-211ENST00000486829 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
ARHGEF3-211ENST00000486829 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 HCLS1P14317 486 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 CTSWP56202 376 aa14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 SF3B3Q15393 1217 aaKnown RBP14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF3-211ENST00000486829 RABL6Q3YEC7 729 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF3-211ENST00000486829 CRY2Q49AN0 593 aa14.31□□□□□ -0.12
ARHGEF3-211ENST00000486829 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
ARHGEF3-211ENST00000486829 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF3-211ENST00000486829 LRRFIP2Q9Y608 721 aaKnown RBP14.31□□□□□ -0.12
ARHGEF3-211ENST00000486829 RTL9Q8NET4 1388 aa14.31□□□□□ -0.12
ARHGEF3-211ENST00000486829 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 CSF1RP07333 972 aa14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 FOXO4P98177 505 aa14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 MTX1Q13505 466 aa14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 DALRD3Q5D0E6 543 aaKnown RBP14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 C2CD5Q86YS7 1000 aa14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 BICC1Q9H694 974 aaKnown RBP14.3□□□□□ -0.12
ARHGEF3-211ENST00000486829 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 H0YIN7 160 aa14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 ARHGAP27Q6ZUM4 889 aa14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 TTLL11Q8NHH1 800 aa14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
ARHGEF3-211ENST00000486829 NPR1P16066 1061 aa14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 HOXA10P31260 410 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 LMBR1LQ6UX01 489 aa14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 DDX46Q7L014 1031 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 MASTLQ96GX5 879 aa14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 RBM17Q96I25 401 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-211ENST00000486829 HMMRO75330 724 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 SRGNP10124 158 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 IFIT5Q13325 482 aaKnown RBP14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 EPHA10Q5JZY3 1008 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 ERICH6BQ5W0A0 696 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 CHMP3Q9Y3E7 222 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 SBF1O95248 1867 aa14.27□□□□□ -0.13
ARHGEF3-211ENST00000486829 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 ALDH1B1P30837 517 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 TTLL6Q8N841 843 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 GREM2Q9H772 168 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
ARHGEF3-211ENST00000486829 ITGA6P23229 1130 aa14.25□□□□□ -0.13
ARHGEF3-211ENST00000486829 ATP8B2P98198 1209 aa14.25□□□□□ -0.13
ARHGEF3-211ENST00000486829 TMC4Q7Z404 712 aa14.25□□□□□ -0.13
ARHGEF3-211ENST00000486829 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
ARHGEF3-211ENST00000486829 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.13
ARHGEF3-211ENST00000486829 GRAPQ13588 217 aa14.24□□□□□ -0.13
ARHGEF3-211ENST00000486829 TAF7LQ5H9L4 462 aa14.24□□□□□ -0.13
ARHGEF3-211ENST00000486829 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
ARHGEF3-211ENST00000486829 SSH3Q8TE77 659 aa14.24□□□□□ -0.13
ARHGEF3-211ENST00000486829 CCDC88AQ3V6T2 1871 aa14.24□□□□□ -0.13
ARHGEF3-211ENST00000486829 SLX4Q8IY92 1834 aa14.24□□□□□ -0.13
ARHGEF3-211ENST00000486829 BBOX1O75936 387 aa14.23□□□□□ -0.13
ARHGEF3-211ENST00000486829 IGHMBP2P38935 993 aaKnown RBP14.23□□□□□ -0.13
ARHGEF3-211ENST00000486829 POLA2Q14181 598 aa14.23□□□□□ -0.13
ARHGEF3-211ENST00000486829 ANKRD18AQ8IVF6 992 aa14.23□□□□□ -0.13
ARHGEF3-211ENST00000486829 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
ARHGEF3-211ENST00000486829 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
ARHGEF3-211ENST00000486829 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 MPHOSPH8Q99549 860 aa14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 COPRSQ9NQ92 184 aa14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
ARHGEF3-211ENST00000486829 FER1L6Q2WGJ9 1857 aa14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 RFX5P48382 616 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 RASSF7Q02833 373 aa14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 HDAC1Q13547 482 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 C9orf131Q5VYM1 1079 aa14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 ZNF526Q8TF50 670 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 BSDC1Q9NW68 430 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 PCDHB15Q9Y5E8 787 aa14.21□□□□□ -0.13
ARHGEF3-211ENST00000486829 C21orf2O43822 256 aa14.2□□□□□ -0.14
ARHGEF3-211ENST00000486829 CIAO1O76071 339 aa14.2□□□□□ -0.14
ARHGEF3-211ENST00000486829 PTPN12Q05209 780 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms