RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 UTYO14607 1347 aa16.08■□□□□ 0.16
HDAC6-229ENST00000486665 IBTKQ9P2D0 1353 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-229ENST00000486665 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
HDAC6-229ENST00000486665 UBE3BQ7Z3V4 1068 aa16.07■□□□□ 0.16
HDAC6-229ENST00000486665 NBPF5PQ86XG9 351 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-229ENST00000486665 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
HDAC6-229ENST00000486665 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
HDAC6-229ENST00000486665 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
HDAC6-229ENST00000486665 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 NFKBIEO00221 500 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 NEFLP07196 543 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 GNAI3P08754 354 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 C2CD5Q86YS7 1000 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 KAZALD1Q96I82 304 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 C1orf115Q9H7X2 142 aa16.06■□□□□ 0.16
HDAC6-229ENST00000486665 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-229ENST00000486665 EPHA10Q5JZY3 1008 aa16.05■□□□□ 0.16
HDAC6-229ENST00000486665 TPTE2Q6XPS3 522 aa16.05■□□□□ 0.16
HDAC6-229ENST00000486665 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-229ENST00000486665 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
HDAC6-229ENST00000486665 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
HDAC6-229ENST00000486665 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-229ENST00000486665 GNAI2P04899 355 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-229ENST00000486665 FSTL1Q12841 308 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 KLRG1Q96E93 195 aa16.04■□□□□ 0.16
HDAC6-229ENST00000486665 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
HDAC6-229ENST00000486665 FER1L6Q2WGJ9 1857 aa16.03■□□□□ 0.16
HDAC6-229ENST00000486665 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
HDAC6-229ENST00000486665 LMNB1P20700 586 aa16.03■□□□□ 0.16
HDAC6-229ENST00000486665 GTF2E1P29083 439 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-229ENST00000486665 FOXO4P98177 505 aa16.03■□□□□ 0.16
HDAC6-229ENST00000486665 ABCC12Q96J65 1359 aa16.02■□□□□ 0.16
HDAC6-229ENST00000486665 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
HDAC6-229ENST00000486665 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
HDAC6-229ENST00000486665 CNBD1Q8NA66 436 aa16.02■□□□□ 0.16
HDAC6-229ENST00000486665 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
HDAC6-229ENST00000486665 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-229ENST00000486665 PCDHB15Q9Y5E8 787 aa16.02■□□□□ 0.16
HDAC6-229ENST00000486665 SLX4Q8IY92 1834 aa16.02■□□□□ 0.16
HDAC6-229ENST00000486665 POTECB2RU33 542 aa16.01■□□□□ 0.15
HDAC6-229ENST00000486665 H0YIN7 160 aa16.01■□□□□ 0.15
HDAC6-229ENST00000486665 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
HDAC6-229ENST00000486665 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
HDAC6-229ENST00000486665 BICC1Q9H694 974 aaKnown RBP16.01■□□□□ 0.15
HDAC6-229ENST00000486665 GLTPD2A6NH11 291 aa16■□□□□ 0.15
HDAC6-229ENST00000486665 NPHP1O15259 732 aa16■□□□□ 0.15
HDAC6-229ENST00000486665 PDE8AO60658 829 aa16■□□□□ 0.15
HDAC6-229ENST00000486665 JMYQ8N9B5 988 aa16■□□□□ 0.15
HDAC6-229ENST00000486665 ZC3H4Q9UPT8 1303 aaKnown RBP15.99■□□□□ 0.15
HDAC6-229ENST00000486665 C21orf2O43822 256 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 CSF1RP07333 972 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 ST5P78524 1137 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 SIRT2Q8IXJ6 389 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 ZNF622Q969S3 477 aaKnown RBP eCLIP15.99■□□□□ 0.15
HDAC6-229ENST00000486665 HDAC5Q9UQL6 1122 aa15.99■□□□□ 0.15
HDAC6-229ENST00000486665 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
HDAC6-229ENST00000486665 AAMPQ13685 434 aa15.98■□□□□ 0.15
HDAC6-229ENST00000486665 RABL6Q3YEC7 729 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-229ENST00000486665 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-229ENST00000486665 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
HDAC6-229ENST00000486665 TTLL11Q8NHH1 800 aa15.98■□□□□ 0.15
HDAC6-229ENST00000486665 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-229ENST00000486665 CTSWP56202 376 aa15.97■□□□□ 0.15
HDAC6-229ENST00000486665 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
HDAC6-229ENST00000486665 BRIP1Q9BX63 1249 aa15.97■□□□□ 0.15
HDAC6-229ENST00000486665 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
HDAC6-229ENST00000486665 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
HDAC6-229ENST00000486665 VEGFAP15692 232 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-229ENST00000486665 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.15
HDAC6-229ENST00000486665 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
HDAC6-229ENST00000486665 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-229ENST00000486665 PDE6BP35913 854 aa15.95■□□□□ 0.14
HDAC6-229ENST00000486665 MTX1Q13505 466 aa15.95■□□□□ 0.14
HDAC6-229ENST00000486665 ERICH6BQ5W0A0 696 aa15.95■□□□□ 0.14
HDAC6-229ENST00000486665 RPAP2Q8IXW5 612 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-229ENST00000486665 GREM2Q9H772 168 aa15.95■□□□□ 0.14
HDAC6-229ENST00000486665 CHMP3Q9Y3E7 222 aa15.95■□□□□ 0.14
HDAC6-229ENST00000486665 SRGAP3O43295 1099 aa15.94■□□□□ 0.14
HDAC6-229ENST00000486665 RFX5P48382 616 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-229ENST00000486665 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
HDAC6-229ENST00000486665 SEC31BQ9NQW1 1179 aa15.94■□□□□ 0.14
HDAC6-229ENST00000486665 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
HDAC6-229ENST00000486665 IGHDP01880 384 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 POLA2Q14181 598 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 CRY2Q49AN0 593 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
HDAC6-229ENST00000486665 SRGNP10124 158 aa15.92■□□□□ 0.14
HDAC6-229ENST00000486665 ITGA6P23229 1130 aa15.92■□□□□ 0.14
HDAC6-229ENST00000486665 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms