RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 NDUFV2P19404 249 aa9.49□□□□□ -0.89
PUDP-204ENST00000486446 MTHFSP49914 203 aa9.49□□□□□ -0.89
PUDP-204ENST00000486446 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
PUDP-204ENST00000486446 ZNF827Q17R98 1081 aa9.49□□□□□ -0.89
PUDP-204ENST00000486446 IFNL2Q8IZJ0 200 aa9.49□□□□□ -0.89
PUDP-204ENST00000486446 ITGB4P16144 1822 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 PHKG2P15735 406 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
PUDP-204ENST00000486446 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
PUDP-204ENST00000486446 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
PUDP-204ENST00000486446 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 V9GY48 417 aaPredicted RBP9.48□□□□□ -0.89
PUDP-204ENST00000486446 MYBBP1AQ9BQG0 1328 aaKnown RBP9.48□□□□□ -0.89
PUDP-204ENST00000486446 CHD4Q14839 1912 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 PALLDQ8WX93 1383 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
PUDP-204ENST00000486446 IL13P35225 146 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 CCDC184Q52MB2 194 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 SULT6B1Q6IMI4 303 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 SMARCC1Q92922 1105 aaPredicted RBP9.47□□□□□ -0.89
PUDP-204ENST00000486446 EMID1Q96A84 441 aaPredicted RBP9.47□□□□□ -0.89
PUDP-204ENST00000486446 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 MTFR1LQ9H019 292 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 TFCP2L1Q9NZI6 479 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
PUDP-204ENST00000486446 SPTLC1O15269 473 aa9.46□□□□□ -0.9
PUDP-204ENST00000486446 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.9
PUDP-204ENST00000486446 MMP16P51512 607 aa9.46□□□□□ -0.9
PUDP-204ENST00000486446 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
PUDP-204ENST00000486446 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.9
PUDP-204ENST00000486446 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
PUDP-204ENST00000486446 PIGBQ92521 554 aa9.46□□□□□ -0.9
PUDP-204ENST00000486446 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
PUDP-204ENST00000486446 PRDM9Q9NQV7 894 aa9.46□□□□□ -0.9
PUDP-204ENST00000486446 RNF123Q5XPI4 1314 aa9.46□□□□□ -0.9
PUDP-204ENST00000486446 C5P01031 1676 aa9.45□□□□□ -0.9
PUDP-204ENST00000486446 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
PUDP-204ENST00000486446 DIAPH1O60610 1272 aaKnown RBP9.45□□□□□ -0.9
PUDP-204ENST00000486446 HMOX1P09601 288 aa9.45□□□□□ -0.9
PUDP-204ENST00000486446 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
PUDP-204ENST00000486446 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
PUDP-204ENST00000486446 COL13A1Q5TAT6 717 aaPredicted RBP9.45□□□□□ -0.9
PUDP-204ENST00000486446 TUBGCP6Q96RT7 1819 aa9.45□□□□□ -0.9
PUDP-204ENST00000486446 CABP4P57796 275 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 DCAF5Q96JK2 942 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 KDRP35968 1356 aa9.44□□□□□ -0.9
PUDP-204ENST00000486446 ERVV-2B6SEH9 535 aa9.43□□□□□ -0.9
PUDP-204ENST00000486446 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
PUDP-204ENST00000486446 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
PUDP-204ENST00000486446 PRELPP51888 382 aa9.43□□□□□ -0.9
PUDP-204ENST00000486446 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
PUDP-204ENST00000486446 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
PUDP-204ENST00000486446 ASAP1Q9ULH1 1129 aa9.43□□□□□ -0.9
PUDP-204ENST00000486446 TAF1LQ8IZX4 1826 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 KDM6AO15550 1401 aaPredicted RBP9.42□□□□□ -0.9
PUDP-204ENST00000486446 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 POLD1P28340 1107 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 SLC19A1P41440 591 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 SIK1P57059 783 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 LIAT1Q6ZQX7 453 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 FAM9BQ8IZU0 186 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 CFAP53Q96M91 514 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 FAM117AQ9C073 453 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 PCDHB15Q9Y5E8 787 aa9.42□□□□□ -0.9
PUDP-204ENST00000486446 COL3A1P02461 1466 aaPredicted RBP9.41□□□□□ -0.9
PUDP-204ENST00000486446 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
PUDP-204ENST00000486446 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
PUDP-204ENST00000486446 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
PUDP-204ENST00000486446 RSPH6AQ9H0K4 717 aa9.41□□□□□ -0.9
PUDP-204ENST00000486446 FCF1Q9Y324 198 aaKnown RBP9.41□□□□□ -0.9
PUDP-204ENST00000486446 PPP2R1AP30153 589 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 LIMD1Q9UGP4 676 aa9.4□□□□□ -0.9
PUDP-204ENST00000486446 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.91
PUDP-204ENST00000486446 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 JUNDP17535 347 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 ITPK1Q13572 414 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 MTMR2Q13614 643 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
PUDP-204ENST00000486446 PRPF38BQ5VTL8 546 aaKnown RBP9.39□□□□□ -0.91
PUDP-204ENST00000486446 SPRYD7Q5W111 196 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 MSL1Q68DK7 614 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 NGEFQ8N5V2 710 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 NFATC2IPQ8NCF5 419 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 ZNF526Q8TF50 670 aaPredicted RBP9.39□□□□□ -0.91
PUDP-204ENST00000486446 NUDCQ9Y266 331 aa9.39□□□□□ -0.91
PUDP-204ENST00000486446 PTCD1O75127 700 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms