RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 STARD13Q9Y3M8 1113 aa10.15□□□□□ -0.78
LTN1-206ENST00000486427 MAP3K6O95382 1288 aa10.14□□□□□ -0.79
LTN1-206ENST00000486427 FKBP4Q02790 459 aaKnown RBP eCLIP10.14□□□□□ -0.79
LTN1-206ENST00000486427 DNAJB12Q9NXW2 375 aaKnown RBP10.14□□□□□ -0.79
LTN1-206ENST00000486427 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 ALAS2P22557 587 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 DGKGP49619 791 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 GSK3AP49840 483 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 SF3B2Q13435 895 aaKnown RBP10.13□□□□□ -0.79
LTN1-206ENST00000486427 LINC00114Q6XXX2 140 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 DHX32Q7L7V1 743 aaKnown RBP10.13□□□□□ -0.79
LTN1-206ENST00000486427 EDEM1Q92611 657 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 NUDT16Q96DE0 195 aaKnown RBP10.13□□□□□ -0.79
LTN1-206ENST00000486427 SCARF2Q96GP6 870 aaPredicted RBP10.13□□□□□ -0.79
LTN1-206ENST00000486427 SLC6A14Q9UN76 642 aa10.13□□□□□ -0.79
LTN1-206ENST00000486427 ZBTB42B2RXF5 422 aa10.12□□□□□ -0.79
LTN1-206ENST00000486427 ICMTO60725 284 aa10.12□□□□□ -0.79
LTN1-206ENST00000486427 DNM1Q05193 864 aaKnown RBP10.12□□□□□ -0.79
LTN1-206ENST00000486427 EGFL7Q9UHF1 273 aa10.12□□□□□ -0.79
LTN1-206ENST00000486427 MMP20O60882 483 aa10.11□□□□□ -0.79
LTN1-206ENST00000486427 FAM13AO94988 1023 aa10.11□□□□□ -0.79
LTN1-206ENST00000486427 PDGFAP04085 211 aa10.11□□□□□ -0.79
LTN1-206ENST00000486427 IRS1P35568 1242 aa10.11□□□□□ -0.79
LTN1-206ENST00000486427 ECM1Q16610 540 aa10.11□□□□□ -0.79
LTN1-206ENST00000486427 BEND7Q8N7W2 519 aaPredicted RBP10.11□□□□□ -0.79
LTN1-206ENST00000486427 NAGPAQ9UK23 515 aa10.11□□□□□ -0.79
LTN1-206ENST00000486427 H3BRB1 525 aa10.1□□□□□ -0.79
LTN1-206ENST00000486427 BRD1O95696 1058 aa10.1□□□□□ -0.79
LTN1-206ENST00000486427 ALBP02768 609 aa10.1□□□□□ -0.79
LTN1-206ENST00000486427 MLLT1Q03111 559 aaPredicted RBP10.1□□□□□ -0.79
LTN1-206ENST00000486427 C8orf86Q6ZUL3 223 aa10.1□□□□□ -0.79
LTN1-206ENST00000486427 PODNQ7Z5L7 613 aa10.1□□□□□ -0.79
LTN1-206ENST00000486427 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
LTN1-206ENST00000486427 TUT1Q9H6E5 874 aaKnown RBP10.1□□□□□ -0.79
LTN1-206ENST00000486427 TLR7Q9NYK1 1049 aaKnown RBP10.1□□□□□ -0.79
LTN1-206ENST00000486427 A6NHS1 94 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 FZD6O60353 706 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 KCNMA1Q12791 1236 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 ALKBH2Q6NS38 261 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 C20orf204Q6ZNR8 217 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 MKL2Q9ULH7 1088 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 POLIQ9UNA4 740 aa10.09□□□□□ -0.79
LTN1-206ENST00000486427 M0R082 166 aa10.08□□□□□ -0.8
LTN1-206ENST00000486427 MZF1P28698 734 aaPredicted RBP10.08□□□□□ -0.8
LTN1-206ENST00000486427 KANK3Q6NY19 840 aa10.08□□□□□ -0.8
LTN1-206ENST00000486427 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
LTN1-206ENST00000486427 ZNF417Q8TAU3 575 aa10.08□□□□□ -0.8
LTN1-206ENST00000486427 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
LTN1-206ENST00000486427 CCDC87Q9NVE4 849 aa10.08□□□□□ -0.8
LTN1-206ENST00000486427 FNDC3AQ9Y2H6 1198 aaKnown RBP10.08□□□□□ -0.8
LTN1-206ENST00000486427 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
LTN1-206ENST00000486427 GPLD1P80108 840 aa10.07□□□□□ -0.8
LTN1-206ENST00000486427 AAMPQ13685 434 aa10.07□□□□□ -0.8
LTN1-206ENST00000486427 GLYCTKQ8IVS8 523 aa10.07□□□□□ -0.8
LTN1-206ENST00000486427 SUV39H2Q9H5I1 410 aa10.07□□□□□ -0.8
LTN1-206ENST00000486427 TMEM63CQ9P1W3 806 aa10.07□□□□□ -0.8
LTN1-206ENST00000486427 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
LTN1-206ENST00000486427 CPB1P15086 417 aa10.06□□□□□ -0.8
LTN1-206ENST00000486427 NRLP54845 237 aa10.06□□□□□ -0.8
LTN1-206ENST00000486427 COL9A3Q14050 684 aaPredicted RBP10.06□□□□□ -0.8
LTN1-206ENST00000486427 HFE2Q6ZVN8 426 aa10.06□□□□□ -0.8
LTN1-206ENST00000486427 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
LTN1-206ENST00000486427 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
LTN1-206ENST00000486427 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
LTN1-206ENST00000486427 PSAPP07602 524 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 ARHGAP4P98171 946 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 RASSF7Q02833 373 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 PLAURQ03405 335 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 C8orf34Q49A92 452 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 PSAPL1Q6NUJ1 521 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 NUDT8Q8WV74 236 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 TRIM11Q96F44 468 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 NSUN5Q96P11 429 aaKnown RBP10.05□□□□□ -0.8
LTN1-206ENST00000486427 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
LTN1-206ENST00000486427 GNEQ9Y223 722 aaKnown RBP10.05□□□□□ -0.8
LTN1-206ENST00000486427 J3QW42 95 aa10.04□□□□□ -0.8
LTN1-206ENST00000486427 GNB5O14775 395 aa10.04□□□□□ -0.8
LTN1-206ENST00000486427 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
LTN1-206ENST00000486427 SOX18P35713 384 aa10.04□□□□□ -0.8
LTN1-206ENST00000486427 PERM1Q5SV97 790 aa10.04□□□□□ -0.8
LTN1-206ENST00000486427 COL13A1Q5TAT6 717 aaPredicted RBP10.04□□□□□ -0.8
LTN1-206ENST00000486427 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
LTN1-206ENST00000486427 ZNF438Q7Z4V0 828 aa10.04□□□□□ -0.8
LTN1-206ENST00000486427 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
LTN1-206ENST00000486427 CYP2E1P05181 493 aaPredicted RBP10.03□□□□□ -0.8
LTN1-206ENST00000486427 PCSK2P16519 638 aa10.03□□□□□ -0.8
LTN1-206ENST00000486427 COL8A1P27658 744 aa10.03□□□□□ -0.8
LTN1-206ENST00000486427 PCSK7Q16549 785 aa10.03□□□□□ -0.8
LTN1-206ENST00000486427 LPIN3Q9BQK8 851 aa10.03□□□□□ -0.8
LTN1-206ENST00000486427 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
LTN1-206ENST00000486427 ABI2Q9NYB9 513 aaPredicted RBP10.03□□□□□ -0.8
LTN1-206ENST00000486427 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
LTN1-206ENST00000486427 LOC102724428A0A0B4J2F2 783 aa10.02□□□□□ -0.81
LTN1-206ENST00000486427 SOWAHDA6NJG2 315 aa10.02□□□□□ -0.81
LTN1-206ENST00000486427 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
LTN1-206ENST00000486427 SIK1P57059 783 aa10.02□□□□□ -0.81
LTN1-206ENST00000486427 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.81
LTN1-206ENST00000486427 XKR5Q6UX68 686 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms